RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FGFBP2Q9BYJ0 223 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 NLNQ9BYT8 704 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 UPF3AQ9H1J1 476 aaKnown RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 LIME1Q9H400 295 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 RWDD1Q9H446 243 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 TMEM231Q9H6L2 316 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 YAE1D1Q9NRH1 226 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 HPF1Q9NWY4 346 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 VPS54Q9P1Q0 977 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF346Q9UL40 294 aaKnown RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 PLEKHA6Q9Y2H5 1048 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 MRPS2Q9Y399 296 aaKnown RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 WIPI2Q9Y4P8 454 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 FAM205AQ6ZU69 1335 aa2.59□□□□□ -2
SCFD1-213ENST00000554776 FGD5Q6ZNL6 1462 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 ZNF724A8MTY0 619 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 MPTX1A8MV57 137 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 KPNA7A9QM74 516 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 H7C423 109 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 K7EPI3 171 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 CCSO14618 274 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 CHEK1O14757 476 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 MTRF1O75570 445 aaKnown RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 DIRAS3O95661 229 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 FHP07954 510 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 HIST1H2AGP0C0S8 130 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 ADORA3P0DMS8 318 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 MBL2P11226 248 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 NCF1P14598 390 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 ZNF10P21506 573 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 PRDX2P32119 198 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 NPY2RP49146 381 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 ZNF131P52739 623 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 NDST2P52849 883 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 GSCP56915 257 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 SSTP61278 116 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 CYCSP99999 105 aaKnown RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 MYBPC1Q00872 1141 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 KLF5Q13887 457 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 KIAA0141Q14154 515 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 LPAL2Q16609 132 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 ECSCRQ19T08 205 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 MTHFSDQ2M296 383 aaKnown RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 MOGAT2Q3SYC2 334 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 GDPGP1Q6ZNW5 385 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 TBC1D10CQ8IV04 446 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 METTL4Q8N3J2 472 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 CHDHQ8NE62 594 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 OR56B1Q8NGI3 324 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 OR10G7Q8NGN6 311 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 SSC4DQ8WTU2 575 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 SELENOMQ8WWX9 145 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 HIST1H2ACQ93077 130 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 PNPLA2Q96AD5 504 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 C18orf12Q96KH6 178 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 AGAP4Q96P64 663 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 ALKBH3Q96Q83 286 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 PINK1Q9BXM7 581 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 ROPN1Q9HAT0 212 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 HOMER3Q9NSC5 361 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 TAS2R16Q9NYV7 291 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 TAS2R3Q9NYW6 316 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 NUDT4Q9NZJ9 180 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 IKZF3Q9UKT9 509 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 AURKCQ9UQB9 309 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 NIP7Q9Y221 180 aaKnown RBP eCLIP2.58□□□□□ -2
SCFD1-213ENST00000554776 ENTPD4Q9Y227 616 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 SLC6A5Q9Y345 797 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 ABCC4O15439 1325 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 UBE4BO95155 1302 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 ZMYM6O95789 1325 aa2.58□□□□□ -2
SCFD1-213ENST00000554776 COL2A1P02458 1487 aaPredicted RBP2.58□□□□□ -2
SCFD1-213ENST00000554776 IGHV3-38A0A0C4DH36 116 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 TRBV5-4A0A0C4DH59 114 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 A0A0J9YWU9 116 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ERI2A8K979 691 aaKnown RBP2.57□□□□□ -2
SCFD1-213ENST00000554776 MEI4A8MW99 385 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 H3BMH7 237 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 FBP2O00757 339 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 CSDE1O75534 798 aaKnown RBP2.57□□□□□ -2
SCFD1-213ENST00000554776 TRIM16O95361 564 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 GUCA1CO95843 209 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 SERPINF2P08697 491 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 DESP17661 470 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 PKLRP30613 574 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 GPC3P51654 580 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 MTTPP55157 894 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 HSD17B7P56937 341 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 HTD2P86397 168 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 FUT7Q11130 342 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 CALCOCO2Q13137 446 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 RIGQ13278 110 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 INAQ16352 499 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ZNF528Q3MIS6 628 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 FASTKD1Q53R41 847 aaKnown RBP2.57□□□□□ -2
SCFD1-213ENST00000554776 C3P1Q6ZMU1 363 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 CDHR3Q6ZTQ4 885 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 STXBP4Q6ZWJ1 553 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 GTSCR1Q86UQ5 136 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms