RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ALDH6A1Q02252 535 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 TUBA3CQ13748 450 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 KIAA0040Q15053 153 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 C6orf136Q5SQH8 315 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 DEPDC1Q5TB30 811 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 PLAG1Q6DJT9 500 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 TUBA3EQ6PEY2 450 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 PRSS41Q7RTY9 318 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 ZNF295-AS1Q8N0V1 137 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 SHISA5Q8N114 240 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 TBC1D19Q8N5T2 526 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 TRPV3Q8NET8 790 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 BCAS4Q8TDM0 211 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 CHTF18Q8WVB6 975 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 CMTM7Q96FZ5 175 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 APIPQ96GX9 242 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 FCRL1Q96LA6 429 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 SIGLEC12Q96PQ1 595 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 F2RL3Q96RI0 385 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 CCDC28BQ9BUN5 200 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 ZNF717Q9BY31 904 aaPredicted RBP13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 KLHL31Q9H511 634 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 HCN3Q9P1Z3 774 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 SLC12A4Q9UP95 1085 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 OR2W5A6NFC9 320 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 H0YIG0 161 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 NDUFS4O43181 175 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 RGS14O43566 566 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 CLDN14O95500 239 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 ALDOCP09972 364 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 SMIM10L1P0DMW3 83 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 IL1RNP18510 177 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 PTX3P26022 381 aaPredicted RBP13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 XCR1P46094 333 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 RAE1P78406 368 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 PHEXP78562 749 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 PWP1Q13610 501 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 CUL3Q13618 768 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 CDSNQ15517 529 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 OR1C1Q15619 314 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 KHDRBS2Q5VWX1 349 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 TMEM198Q66K66 360 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 SPINK14Q6IE38 97 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 OGFOD2Q6N063 350 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 CHSY3Q70JA7 882 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 ANKRD37Q7Z713 158 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 SPPL2CQ8IUH8 684 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 KCT2Q8NC54 265 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 OR51Q1Q8NH59 317 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 ADAMTS18Q8TE60 1221 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 SLC13A3Q8WWT9 602 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 CCT6BQ92526 530 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 TUBGCP3Q96CW5 907 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 MS4A6EQ96DS6 147 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 SMIM10Q96HG1 83 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 GPR137Q96N19 417 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 SERPINI1Q99574 410 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 UTP23Q9BRU9 249 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 MRPL1Q9BYD6 325 aaKnown RBP13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 LRTM1Q9HBL6 345 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 TCF7L2Q9NQB0 619 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 C1orf109Q9NX04 203 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 VPS29Q9UBQ0 182 aa13.09□□□□□ -0.31
SPTLC2-202ENST00000554365 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 SGK494L7N484 410 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 SAP18O00422 153 aaKnown RBP13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 PLPP1O14494 284 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 PEX11AO75192 247 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 SEMA3DO95025 777 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 NSA2O95478 260 aaKnown RBP13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 SERPIND1P05546 499 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 AGAP20933 346 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 SSTR2P30874 369 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 CD96P40200 585 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 OC90Q02509 493 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 MEP1AQ16819 746 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 IMPG1Q17R60 797 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 RFTN2Q52LD8 501 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 KRTCAP3Q53RY4 240 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 TOR1AIP1Q5JTV8 583 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 TMEM214Q6NUQ4 689 aaKnown RBP13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 H3F3CQ6NXT2 135 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 NCCRP1Q6ZVX7 275 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 ACAD11Q709F0 780 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 METTL4Q8N3J2 472 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 CAMKVQ8NCB2 501 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 MDS2Q8NDY4 140 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 THAP3Q8WTV1 239 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 PPP3R2Q96LZ3 170 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 SORBS1Q9BX66 1292 aaKnown RBP13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 ZNF385DQ9H6B1 395 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 PFDN4Q9NQP4 134 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 SIRT5Q9NXA8 310 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 ZNF835Q9Y2P0 537 aa13.08□□□□□ -0.32
SPTLC2-202ENST00000554365 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms