RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SERTAD3Q9UJW9 196 aa13.63□□□□□ -0.23
SHMT2-208ENST00000553868 AP3M1Q9Y2T2 418 aa13.63□□□□□ -0.23
SHMT2-208ENST00000553868 RRP15Q9Y3B9 282 aaKnown RBP13.63□□□□□ -0.23
SHMT2-208ENST00000553868 PCDHGA3Q9Y5H0 932 aa13.63□□□□□ -0.23
SHMT2-208ENST00000553868 MRPS18BQ9Y676 258 aaKnown RBP13.63□□□□□ -0.23
SHMT2-208ENST00000553868 PRSS51A0A1B0GVH4 220 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 C1orf226A1L170 272 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 FITM1A5D6W6 292 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 ANKRD65E5RJM6 399 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 H0YHG0 523 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 MKRN2OSH3BPM6 223 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 CERS1P27544 350 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 TRPC1P48995 793 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 ALDH9A1P49189 494 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 PSME3P61289 254 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 FAM53BQ14153 422 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 MUM1Q2TAK8 710 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 SPATS1Q496A3 300 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 NADK2Q4G0N4 442 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 DEFB134Q4QY38 66 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 C6orf10Q5SRN2 563 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 YOD1Q5VVQ6 348 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-208ENST00000553868 TLDC1Q6P9B6 456 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 SLC2A7Q6PXP3 512 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 DHDDSQ86SQ9 333 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 FBXO27Q8NI29 283 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 LRRC58Q96CX6 371 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 SH3GL1Q99961 368 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 THTPAQ9BU02 230 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 CADM1Q9BY67 442 aaKnown RBP13.62□□□□□ -0.23
SHMT2-208ENST00000553868 SPAG4Q9NPE6 437 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 TMEM9Q9P0T7 183 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 MAP10Q9P2G4 905 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 BTNL2Q9UIR0 455 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 ITGB1BP2Q9UKP3 347 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 PSME2Q9UL46 239 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 PCDHGB4Q9UN71 923 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 SPG11Q96JI7 2443 aa13.62□□□□□ -0.23
SHMT2-208ENST00000553868 CROCCQ5TZA2 2017 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 A0A096LPI6 279 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 HYKKA2RU49 373 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 ASPDHA6ND91 283 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 A8MU76 341 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 C4orf51C9J302 202 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 RNASET2O00584 256 aaKnown RBP13.61□□□□□ -0.23
SHMT2-208ENST00000553868 RFXANKO14593 260 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 GALR3O60755 368 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-208ENST00000553868 CIB2O75838 187 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 OR2B3O76000 313 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 KLHL18O94889 574 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 ANP32DO95626 131 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 NR2F6P10588 404 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 LAMP1P11279 417 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 PIM1P11309 404 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-208ENST00000553868 AVPR1BP47901 424 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 ITGA1P56199 1179 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 KCNJ2P63252 427 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 PAGE3Q5JUK9 113 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 NDUFAF5Q5TEU4 345 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 C6orf163Q5TEZ5 329 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 OR4F3Q6IEY1 312 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 SCUBE1Q8IWY4 988 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 SAMD14Q8IZD0 417 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-208ENST00000553868 ADAMTS18Q8TE60 1221 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 GTF2H4Q92759 462 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 CCDC74BQ96LY2 380 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 GBP5Q96PP8 586 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 IL1RL2Q9HB29 575 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 GIMAP4Q9NUV9 329 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 TAS2R7Q9NYW3 318 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 ADA2Q9NZK5 511 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 AKAP7Q9P0M2 348 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-208ENST00000553868 FBXW2Q9UKT8 454 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 ASB4Q9Y574 426 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 PCDHA9Q9Y5H5 950 aa13.61□□□□□ -0.23
SHMT2-208ENST00000553868 IGHV5-10-1A0A0J9YXX1 117 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 TMEM150CB9EJG8 249 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 IL1RNP18510 177 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 TCN2P20062 427 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 CPN2P22792 545 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 ARSFP54793 590 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 MC1RQ01726 317 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 TNFRSF17Q02223 184 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 SAMD4BQ5PRF9 694 aaKnown RBP13.6□□□□□ -0.23
SHMT2-208ENST00000553868 C8orf82Q6P1X6 216 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-208ENST00000553868 RIPOR1Q6ZS17 1223 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 TIPARPQ7Z3E1 657 aaKnown RBP13.6□□□□□ -0.23
SHMT2-208ENST00000553868 ARHGAP22Q7Z5H3 698 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 BPHLQ86WA6 291 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-208ENST00000553868 AMER3Q8N944 861 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 FAM47BQ8NA70 645 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 ZFP28Q8NHY6 868 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 KIAA1143Q96AT1 154 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-208ENST00000553868 RNF31Q96EP0 1072 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 MVB12AQ96EY5 273 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 CCDC115Q96NT0 180 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 PANX1Q96RD7 426 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 FGF21Q9NSA1 209 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 OCIAD1Q9NX40 245 aa13.6□□□□□ -0.23
SHMT2-208ENST00000553868 TEX10Q9NXF1 929 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms