RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ST13P4Q8IZP2 240 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-206ENST00000553529 C1orf52Q8N6N3 182 aaKnown RBP16.83■□□□□ 0.28
SHMT2-206ENST00000553529 OR2W6PQ8NHA6 318 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 UBLCP1Q8WVY7 318 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-206ENST00000553529 RIT1Q92963 219 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 TRIM44Q96DX7 344 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-206ENST00000553529 RBM18Q96H35 190 aaKnown RBP16.83■□□□□ 0.28
SHMT2-206ENST00000553529 FBXL20Q96IG2 436 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 ELOVL6Q9H5J4 265 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 ANKRA2Q9H9E1 313 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 PROK2Q9HC23 129 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 TIMMDC1Q9NPL8 285 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 PSMC3IPQ9P2W1 217 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-206ENST00000553529 HEY2Q9UBP5 337 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 MEMO1Q9Y316 297 aa16.83■□□□□ 0.28
SHMT2-206ENST00000553529 NAV2Q8IVL1 2488 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 G3V2L1 256 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 KLRC4-KLRK1H3BQV0 150 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 SEMA3DO95025 777 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 TUBB4AP04350 444 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 RFPL3SP0C7P2 107 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 MAGEA5P43359 124 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 RAE1P78406 368 aaKnown RBP16.82■□□□□ 0.28
SHMT2-206ENST00000553529 HMGCS1Q01581 520 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 RBPJQ06330 500 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 EBPQ15125 230 aaKnown RBP16.82■□□□□ 0.28
SHMT2-206ENST00000553529 PRSS53Q2L4Q9 553 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 ZNF791Q3KP31 576 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-206ENST00000553529 PIGGQ5H8A4 983 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 SP5Q6BEB4 398 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-206ENST00000553529 METTL2BQ6P1Q9 378 aaKnown RBP16.82■□□□□ 0.28
SHMT2-206ENST00000553529 GHDCQ8N2G8 530 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 OR10G3Q8NGC4 313 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 C16orf52Q8NHV5 167 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 ZBTB9Q96C00 473 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 TM4SF18Q96CE8 201 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 EBPLQ9BY08 206 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 ACPTQ9BZG2 426 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 SHCBP1LQ9BZQ2 653 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 WWTR1Q9GZV5 400 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 GSTO2Q9H4Y5 243 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 ANKZF1Q9H8Y5 726 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 MS4A12Q9NXJ0 267 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 COPS7AQ9UBW8 275 aa16.82■□□□□ 0.28
SHMT2-206ENST00000553529 CACNA1DQ01668 2161 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 OTCP00480 354 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 TPOP07202 933 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 COX7A2P14406 83 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 TLX1P31314 330 aaPredicted RBP16.81■□□□□ 0.28
SHMT2-206ENST00000553529 FEN1P39748 380 aaKnown RBP16.81■□□□□ 0.28
SHMT2-206ENST00000553529 PPIAP62937 165 aaKnown RBP16.81■□□□□ 0.28
SHMT2-206ENST00000553529 PLGLB1Q02325 96 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 FOXO1Q12778 655 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 EXOSC7Q15024 291 aaKnown RBP16.81■□□□□ 0.28
SHMT2-206ENST00000553529 SPRED3Q2MJR0 410 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 KRTCAP3Q53RY4 240 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 EMC4Q5J8M3 183 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 OR52E8Q6IFG1 317 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 RTL4Q6ZR62 310 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 TMEM251Q8N6I4 163 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 ADCY4Q8NFM4 1077 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 OR8K3Q8NH51 312 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 APIPQ96GX9 242 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 CXorf21Q9HAI6 301 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 SH2D2AQ9NP31 389 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 TRPS1Q9UHF7 1281 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 CES1P1Q9UKY3 287 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 TMCO1Q9UM00 188 aa16.81■□□□□ 0.28
SHMT2-206ENST00000553529 IQANK1A0A1B0GTG1 560 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 GLSO94925 669 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-206ENST00000553529 ESRRAP11474 423 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-206ENST00000553529 ATP5F1P24539 256 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-206ENST00000553529 ALDH9A1P49189 494 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 XKP51811 444 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 MAPK12P53778 367 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 BTKQ06187 659 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 MGAT2Q10469 447 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 GTF3C1Q12789 2109 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 CRYBG3Q68DQ2 2970 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 RNF111Q6ZNA4 994 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 FAM47EQ6ZV65 393 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 GPRIN3Q6ZVF9 776 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 ZNF441Q8N8Z8 693 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 NUBPLQ8TB37 319 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 MTBPQ96DY7 904 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 DMRTA2Q96SC8 542 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 L2HGDHQ9H9P8 463 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 PSD3Q9NYI0 1048 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 PPT2Q9UMR5 302 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 PCDHA9Q9Y5H5 950 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 PTGDR2Q9Y5Y4 395 aa16.8■□□□□ 0.28
SHMT2-206ENST00000553529 EXPH5Q8NEV8 1989 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 UNC79Q9P2D8 2635 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 ATP6AP2A0A1C7CYW4 349 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 LRRC3CA6NJW4 275 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 ERAL1O75616 437 aaKnown RBP16.79■□□□□ 0.28
SHMT2-206ENST00000553529 ATP6AP2O75787 350 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 PROCP04070 461 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 SLC35E2P0CK97 266 aa16.79■□□□□ 0.28
SHMT2-206ENST00000553529 CPMP14384 443 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms