RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 CDC20Q12834 499 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 E2F2Q14209 437 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 GK3PQ14409 553 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 DEFB109BQ30KR1 87 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 TCHHL1Q5QJ38 904 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 KHDRBS2Q5VWX1 349 aaKnown RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 METTL21CQ5VZV1 264 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 CES4AQ5XG92 561 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 MRPL14Q6P1L8 145 aaKnown RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 PAOXQ6QHF9 649 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 LAPTM4BQ86VI4 370 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 AFAP1L2Q8N4X5 818 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 TMEM102Q8N9M5 508 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 OR2L5Q8NG80 312 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 OR2Y1Q8NGV0 311 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 AGR3Q8TD06 166 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 SELENOMQ8WWX9 145 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 MAGEB10Q96LZ2 347 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 KCNA7Q96RP8 456 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 EBF4Q9BQW3 602 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 CRB3Q9BUF7 120 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 GATA5Q9BWX5 397 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 SORBS1Q9BX66 1292 aaKnown RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 MS4A8Q9BY19 250 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 ANKRD60Q9BZ19 345 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 WDR54Q9H977 334 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 CLK4Q9HAZ1 481 aaKnown RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 MKKSQ9NPJ1 570 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 QPCTLQ9NXS2 382 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 TRPS1Q9UHF7 1281 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 ADGRE2Q9UHX3 823 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 ZNF225Q9UK10 706 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 MKL2Q9ULH7 1088 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 SSUH2Q9Y2M2 353 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 TIMM22Q9Y584 194 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 MYOCOSA0A1B0GUC4 107 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 OR2W5A6NFC9 320 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 CHST10O43529 356 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 B3GALT2O43825 422 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 TBX6O95947 436 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 PDYNP01213 254 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 KRT6AP02538 564 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 KRT6BP04259 564 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 HEXBP07686 556 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 COX4I1P13073 169 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 ZNF26P17031 533 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 JAK1P23458 1154 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 PTX3P26022 381 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 CERS1P27544 350 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 PIK3CBP42338 1070 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 GSSP48637 474 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 KRT6CP48668 564 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 AP5B1Q2VPB7 878 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 GGTA1PQ4G0N0 100 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 TMEM35AQ53FP2 167 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 NANOGP8Q6NSW7 305 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 C16orf87Q6PH81 154 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 SCIMPQ6UWF3 145 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 GPR155Q7Z3F1 870 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 CLVS1Q8IUQ0 354 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 LSM14AQ8ND56 463 aaKnown RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 WDR20Q8TBZ3 569 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 RGMAQ96B86 450 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 TMIGD2Q96BF3 282 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 KCNC2Q96PR1 638 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 LIN28AQ9H9Z2 209 aaKnown RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 C3orf18Q9UK00 162 aa9.38□□□□□ -0.91
LETMD1-234ENST00000552645 NXT1Q9UKK6 140 aaKnown RBP9.38□□□□□ -0.91
LETMD1-234ENST00000552645 ATMQ13315 3056 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 MED13Q9UHV7 2174 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 IDSB3KWA1 339 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 FAM227AF5H4B4 570 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 MANBAO00462 879 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 B4GALT2O60909 372 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 ULK1O75385 1050 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 ETHE1O95571 254 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 CHRNGP07510 517 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 UMODP07911 640 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 TFPTP0C1Z6 253 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 SMIM10L1P0DMW3 83 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 EMP2P54851 167 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 FOXA1P55317 472 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 FLOT2Q14254 428 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 UGT8Q16880 541 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 ADPRMQ3LIE5 342 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 PIGGQ5H8A4 983 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 CLEC6AQ6EIG7 209 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 ABHD17CQ6PCB6 329 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 BNC2Q6ZN30 1099 aaPredicted RBP9.37□□□□□ -0.91
LETMD1-234ENST00000552645 RAB43Q86YS6 212 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 ZC3H7AQ8IWR0 971 aaKnown RBP9.37□□□□□ -0.91
LETMD1-234ENST00000552645 IQCF2Q8IXL9 164 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 LILRA2Q8N149 483 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 SRFBP1Q8NEF9 429 aaKnown RBP9.37□□□□□ -0.91
LETMD1-234ENST00000552645 SMIM10Q96HG1 83 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 CNDP1Q96KN2 507 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 SERINC2Q96SA4 455 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 SPSB2Q99619 263 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 MROQ9BYG7 248 aa9.37□□□□□ -0.91
LETMD1-234ENST00000552645 SLC29A3Q9BZD2 475 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms