RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 CFAP157Q5JU67 520 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 C1orf189Q5VU69 101 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 ARHGEF16Q5VV41 709 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 SPSB3Q6PJ21 355 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 DPY19L2P2Q6ZN68 376 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 LPCAT2Q7L5N7 544 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 GPR142Q7Z601 462 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 VPS36Q86VN1 386 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 FAM131BQ86XD5 332 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 LACC1Q8IV20 430 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 OR4N5Q8IXE1 308 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 DCLK2Q8N568 766 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 RFLNBQ8N5W9 214 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 ARFGAP2Q8N6H7 521 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 STPG4Q8N801 248 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 NFAM1Q8NET5 270 aaPredicted RBP3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 OR4D10Q8NGI6 311 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 WDR36Q8NI36 951 aaKnown RBP3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 TM9SF4Q92544 642 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 PNPLA2Q96AD5 504 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 TTC25Q96NG3 672 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 TCHPQ9BT92 498 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 ZNF71Q9NQZ8 489 aaPredicted RBP3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 MED17Q9NVC6 651 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 RDH8Q9NYR8 311 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 WIPI2Q9Y4P8 454 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 KLF2Q9Y5W3 355 aaPredicted RBP3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 SELENOKQ9Y6D0 94 aa3.51□□□□□ -1.85
LSM6P2-201ENST00000552208 RNF123Q5XPI4 1314 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 CACNA1IQ9P0X4 2223 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 A0A1W2PR80 420 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 K7EQM0 130 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 AP3B1O00203 1094 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 B4GAT1O43505 415 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 SDC3O75056 442 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 MTX2O75431 263 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 UFL1O94874 794 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 TOXO94900 526 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 MBD3O95983 291 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 PRKAR1AP10644 381 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 CA8P35219 290 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 MTIF2P46199 727 aaKnown RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 XGP55808 180 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 RPL27P61353 136 aaKnown RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 RPS4XP62701 263 aaKnown RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 PPIAP62937 165 aaKnown RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 MRPS21P82921 87 aaKnown RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 P2RY14Q15391 338 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 TEAD2Q15562 447 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 CDKN3Q16667 212 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 POM121L1PQ3SYA9 428 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 RHBDD2Q6NTF9 364 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 C19orf48Q6RUI8 117 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 Q6ZRG5 221 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 SMIM29Q86T20 159 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 GVQW1Q8N7I0 195 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 NIPA2Q8N8Q9 360 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 MLKLQ8NB16 471 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 RELL2Q8NC24 303 aaPredicted RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 RDH11Q8TC12 318 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 MRPL24Q96A35 216 aaKnown RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 AZIN2Q96A70 460 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 PINX1Q96BK5 328 aaKnown RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 LYZL4Q96KX0 146 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 LRR1Q96L50 414 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 PSKH2Q96QS6 385 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 ZNF607Q96SK3 696 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 MEIS3Q99687 375 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 PUS3Q9BZE2 481 aaKnown RBP3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 ATP6V1HQ9UI12 483 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 SLC6A5Q9Y345 797 aa3.5□□□□□ -1.85
LSM6P2-201ENST00000552208 MYH14Q7Z406 1995 aaKnown RBP3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 ASB14A6NK59 587 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 CCDC169A6NNP5 214 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 A8MU76 341 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 MEI4A8MW99 385 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 SMIM1B2RUZ4 78 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 NPIPB9F8W1W9 429 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 SURF4O15260 269 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 NUDT21O43809 227 aaKnown RBP3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 CDC123O75794 336 aaPredicted RBP3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 CEACAM4O75871 244 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 RHOBTB1O94844 696 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 ATP1A1P05023 1023 aaKnown RBP3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 IGKV2-30P06310 120 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 RPA2P15927 270 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 AMD1P17707 334 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 ATP6V1C1P21283 382 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 GIFP27352 417 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 DLSTP36957 453 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 TAGLN2P37802 199 aaKnown RBP3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 MATKP42679 507 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 ZFP36L2P47974 494 aaKnown RBP3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 SULT1E1P49888 294 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 GUCY2DQ02846 1103 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 PARP6Q2NL67 630 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 HKDC1Q2TB90 917 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 LINC01620Q4KN68 170 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 CCDC183Q5T5S1 534 aa3.49□□□□□ -1.85
LSM6P2-201ENST00000552208 SLC35E4Q6ICL7 350 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms