RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ZNF792Q3KQV3 632 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CDKL4Q5MAI5 379 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 C6orf136Q5SQH8 315 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM102BQ5T8I3 360 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM102AQ5T9C2 384 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 DDI2Q5TDH0 399 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 MEDAGQ5VYS4 303 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PLAG1Q6DJT9 500 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 C17orf107Q6ZR85 190 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 Q6ZSR9 355 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 RPS27LQ71UM5 84 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PGAP1Q75T13 922 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF551Q7Z340 670 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FGD2Q7Z6J4 655 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 GALNT5Q7Z7M9 940 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TRIM69Q86WT6 500 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 STX12Q86Y82 276 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ZDHHC17Q8IUH5 632 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SKA3Q8IX90 412 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TP53INP2Q8IXH6 220 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM126BQ8IXS8 530 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM9CQ8IZT9 166 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ARHGEF39Q8N4T4 335 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 OXR1Q8N573 874 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM71CQ8NEG0 241 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 MCPH1Q8NEM0 835 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TRPV1Q8NER1 839 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 OR5M9Q8NGP3 310 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 OR1S1Q8NH92 325 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 WDR36Q8NI36 951 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 WDR20Q8TBZ3 569 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PCNPQ8WW12 178 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ELP4Q96EB1 424 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TSPAN17Q96FV3 270 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF419Q96HQ0 510 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 RCC1LQ96I51 464 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PIWIL1Q96J94 861 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 C7orf34Q96L11 122 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ATOH8Q96SQ7 321 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 G6PC3Q9BUM1 346 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CNPPD1Q9BV87 410 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 KATNB1Q9BVA0 655 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SPATA5L1Q9BVQ7 753 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 LGR4Q9BXB1 951 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 MAGEB5Q9BZ81 275 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ANKRD19PQ9H560 264 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TFB2MQ9H5Q4 396 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 C11orf49Q9H6J7 331 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ANKRA2Q9H9E1 313 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PIH1D1Q9NWS0 290 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SPHK1Q9NYA1 384 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR83Q9NYM4 423 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TREM2Q9NZC2 230 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CGGBP1Q9UFW8 167 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF225Q9UK10 706 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FBXL2Q9UKC9 423 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 OGDHLQ9ULD0 1010 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PLCL2Q9UPR0 1127 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CHST2Q9Y4C5 530 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CCL27Q9Y4X3 112 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 NUBP2Q9Y5Y2 271 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 DNAJC25-GNG10A0A024R161 153 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 LOC102723532A0A0G2JNH3 316 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 A0A1B0GTL3 188 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 LOC285095A0A1B0GVY8 99 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 TCRBV16S1A1N1A0A5B0 115 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 RAB19A4D1S5 217 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 TMEM150BA6NC51 233 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 ANKDD1BA6NHY2 528 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 HMSDA8MTL9 139 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 MCRIP1C9JLW8 97 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 I6L893 689 aaPredicted RBP5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 CDC7O00311 574 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 GNGT2O14610 69 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 PHYHO14832 338 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 HNRNPDLO14979 420 aaKnown RBP5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 TO15178 435 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 ADAMDEC1O15204 470 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 SGCEO43556 437 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 GALR3O60755 368 aaPredicted RBP5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 AQP8O94778 261 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 OR2A4O95047 310 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 RASGRP1O95267 797 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 MT-CYBP00156 380 aaPredicted RBP5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 VIPP01282 170 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 EDN1P05305 212 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 RB1P06400 928 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 FCER2P06734 321 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 THP07101 528 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 HOXC6P09630 235 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 RNF224P0DH78 156 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 TFPIP10646 304 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 UROSP10746 265 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC2A2P11168 524 aaPredicted RBP5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 GABRA1P14867 456 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 CD19P15391 556 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 CD1DP15813 335 aa5.02□□□□□ -1.61
LSM3P2-201ENST00000551246 TAL1P17542 331 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms