RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 UCN3Q969E3 161 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 ANKRD9Q96BM1 317 aaPredicted RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 TRIM44Q96DX7 344 aaPredicted RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 PHF21BQ96EK2 531 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 C14orf79Q96F83 325 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 SCMH1Q96GD3 660 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 KCNC2Q96PR1 638 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TMEM237Q96Q45 408 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 LPAR4Q99677 370 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 MRPL57Q9BQC6 102 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 UTP23Q9BRU9 249 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 TBCDQ9BTW9 1192 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 C1QTNF3Q9BXJ4 246 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 HEATR1Q9H583 2144 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 NOL11Q9H8H0 719 aaKnown RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 IPPKQ9H8X2 491 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 ACTR8Q9H981 624 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 LYRM4Q9HD34 91 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 PRTFDC1Q9NRG1 225 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 ANKRD10Q9NXR5 420 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TMEM216Q9P0N5 145 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 PSMC3IPQ9P2W1 217 aaPredicted RBP6.39□□□□□ -1.39
CBX5-204ENST00000550411 FETUBQ9UGM5 382 aa6.39□□□□□ -1.39
CBX5-204ENST00000550411 TRBV11-1A0A0K0K1C0 115 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 A0A1W2PPM1 405 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 WASHC1A8K0Z3 465 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 GABRR3A8MPY1 467 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 NPIPA5E9PKD4 350 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 GOLGA8RI6L899 631 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 HRKO00198 91 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 ASNA1O43681 348 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 FGF17O60258 216 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 DLX3O60479 287 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 ZNF354AO60765 605 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 LDB3O75112 727 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 NEURL1O76050 574 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 MYO1DO94832 1006 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 AIFM1O95831 613 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 RBP1P09455 135 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 TPP2P29144 1249 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 SERPINB1P30740 379 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 CD96P40200 585 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 SSR2P43308 183 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 HTR6P50406 440 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 HSD17B7P56937 341 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 MLF1P58340 268 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 VSNL1P62760 191 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 TNFRSF17Q02223 184 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 OC90Q02509 493 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 TLE4Q04727 773 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 TESK1Q15569 626 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 OR1C1Q15619 314 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 CPSF6Q16630 551 aaKnown RBP eCLIP6.38□□□□□ -1.39
CBX5-204ENST00000550411 UNC50Q53HI1 259 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 LIPJQ5W064 366 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 C18orf63Q68DL7 685 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 SPINK14Q6IE38 97 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 SLC25A25Q6KCM7 469 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 SPNS3Q6ZMD2 512 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 C16orf47Q6ZP98 133 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 DGAT2L6Q6ZPD8 337 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 NCCRP1Q6ZVX7 275 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 GALNTL5Q7Z4T8 443 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 CDH24Q86UP0 819 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 MYLK4Q86YV6 388 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 MMP21Q8N119 569 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 GHDCQ8N2G8 530 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 ZCCHC7Q8N3Z6 543 aaKnown RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 HORMAD2Q8N7B1 307 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 B3GNT7Q8NFL0 401 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 OR4F6Q8NGB9 312 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 PHF10Q8WUB8 498 aaKnown RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 PTPMT1Q8WUK0 201 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 UBE2E3Q969T4 207 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 NCLNQ969V3 563 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 MTBPQ96DY7 904 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 CMTM7Q96FZ5 175 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 FAR2Q96K12 515 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 SCYL1Q96KG9 808 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 SPOCK3Q9BQ16 436 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 NTMT1Q9BV86 223 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 ENKD1Q9H0I2 346 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 C12orf65Q9H3J6 166 aaKnown RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 TRIM45Q9H8W5 580 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 COPS7BQ9H9Q2 264 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 ADAP2Q9NPF8 381 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 SEMA4BQ9NPR2 832 aaPredicted RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 FARSBQ9NSD9 589 aaKnown RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 TMCO1Q9UM00 188 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 NPIPA1Q9UND3 350 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 ATG4BQ9Y4P1 393 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 ASB4Q9Y574 426 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 TNPO3Q9Y5L0 923 aaKnown RBP6.38□□□□□ -1.39
CBX5-204ENST00000550411 IKBKGQ9Y6K9 419 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 NF1P21359 2839 aa6.38□□□□□ -1.39
CBX5-204ENST00000550411 RAI1Q7Z5J4 1906 aaPredicted RBP6.37□□□□□ -1.39
CBX5-204ENST00000550411 A0A088AWK7 358 aa6.37□□□□□ -1.39
CBX5-204ENST00000550411 A0A0G2JMM0 328 aa6.37□□□□□ -1.39
CBX5-204ENST00000550411 A0A1W2PPB8 328 aa6.37□□□□□ -1.39
CBX5-204ENST00000550411 A0A1W2PR48 441 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms