RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	AP1M1	Q9BXS5	423 aa		3.09	□□□□□ -1.91
CNOT2-222	ENST00000550155	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.09	□□□□□ -1.91
CNOT2-222	ENST00000550155	RAI14	Q9P0K7	980 aa		3.09	□□□□□ -1.91
CNOT2-222	ENST00000550155	RPS6KB2	Q9UBS0	482 aa		3.09	□□□□□ -1.91
CNOT2-222	ENST00000550155	TNR	Q92752	1358 aa		3.09	□□□□□ -1.92
CNOT2-222	ENST00000550155	IGHV3-35	A0A0C4DH35	117 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	SLC15A5	A6NIM6	579 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	GJB5	O95377	273 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	NUDT14	O95848	222 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	HOXC4	P09017	264 aa	Predicted RBP	3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	ZNF32	P17041	273 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	GLRA1	P23415	457 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	ZNF133	P52736	654 aa	Predicted RBP	3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	GABPA	Q06546	454 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	TFCP2	Q12800	502 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	CDC37	Q16543	378 aa	Predicted RBP	3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	WDR25	Q64LD2	544 aa	Predicted RBP	3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	TRAT1	Q6PIZ9	186 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	PET117	Q6UWS5	81 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	SIGLEC15	Q6ZMC9	328 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	THNSL1	Q8IYQ7	743 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	FAM162A	Q96A26	154 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	SLCO4A1	Q96BD0	722 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	ULK4	Q96C45	1275 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	ARGLU1	Q9NWB6	273 aa	Predicted RBP	3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	KLHL21	Q9UJP4	597 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	ERVK-19	Q9WJR5	959 aa		3.08	□□□□□ -1.92
CNOT2-222	ENST00000550155	TRAV34	A0A0B4J273	112 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155		A8MX80	341 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	CHUK	O15111	745 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	STAM2	O75886	525 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	DUSP14	O95147	198 aa	Known RBP	3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	BAG2	O95816	211 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	ACTL6A	O96019	429 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	PROS1	P07225	676 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	SLC35E2	P0CK97	266 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	CTNNA1	P35221	906 aa	Known RBP	3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	CD47	Q08722	323 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	LCP2	Q13094	533 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	MEF2D	Q14814	521 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	TGIF1	Q15583	401 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	UNC50	Q53HI1	259 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	DCAF12	Q5T6F0	453 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	LCE1C	Q5T751	118 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	LCE1B	Q5T7P3	118 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	FAM219B	Q5XKK7	198 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	APOOL	Q6UXV4	268 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155		Q6ZRG5	221 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	FBXW8	Q8N3Y1	598 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	NKAIN3	Q8N8D7	197 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155		Q8N9G6	341 aa	Predicted RBP	3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	UXS1	Q8NBZ7	420 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	CHDH	Q8NE62	594 aa	Predicted RBP	3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	OR4F5	Q8NH21	305 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	ZNF564	Q8TBZ8	553 aa	Predicted RBP	3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	CRYGN	Q8WXF5	182 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	FAM122A	Q96E09	287 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	SPATA17	Q96L03	361 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	SSX3	Q99909	188 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	GDF3	Q9NR23	364 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	TMEM161A	Q9NX61	479 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	KLRF1	Q9NZS2	232 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	TEKT2	Q9UIF3	430 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155	KIAA1217	Q5T5P2	1943 aa		3.07	□□□□□ -1.92
CNOT2-222	ENST00000550155		A0A087X0K7	114 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	ZFP92	A6NM28	416 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155		K7ERI5	159 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	SLC30A4	O14863	429 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	ST8SIA3	O43173	380 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	MTIF2	P46199	727 aa	Known RBP	3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	ARHGAP1	Q07960	439 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	ASAH1	Q13510	395 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	P2RY14	Q15391	338 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	PAN3	Q58A45	887 aa	Known RBP	3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	ACER2	Q5QJU3	275 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	LRRC38	Q5VT99	294 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	ZNF544	Q6NX49	715 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	CAVIN1	Q6NZI2	390 aa	Known RBP	3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	NHLRC1	Q6VVB1	395 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	KRTAP5-2	Q701N4	177 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	SIX6OS1	Q8N1H7	587 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	SETD7	Q8WTS6	366 aa	Known RBP	3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	TFB1M	Q8WVM0	346 aa	Known RBP	3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	PNPLA2	Q96AD5	504 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	SNRNP40	Q96DI7	357 aa	Known RBP	3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	CDKN2AIPNL	Q96HQ2	116 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	SPAG8	Q99932	426 aa	Predicted RBP	3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155		Q9HAA7	133 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	MYOZ2	Q9NPC6	264 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	MIS18A	Q9NYP9	233 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	PRODH2	Q9UF12	536 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	POMT1	Q9Y6A1	747 aa		3.06	□□□□□ -1.92
CNOT2-222	ENST00000550155	MEI4	A8MW99	385 aa		3.05	□□□□□ -1.92
CNOT2-222	ENST00000550155		H7C0S8	307 aa		3.05	□□□□□ -1.92
CNOT2-222	ENST00000550155	PSMD3	O43242	534 aa		3.05	□□□□□ -1.92
CNOT2-222	ENST00000550155	ATP9A	O75110	1047 aa		3.05	□□□□□ -1.92
CNOT2-222	ENST00000550155	SBK2	P0C263	348 aa		3.05	□□□□□ -1.92
CNOT2-222	ENST00000550155	MBL2	P11226	248 aa	Predicted RBP	3.05	□□□□□ -1.92
CNOT2-222	ENST00000550155	CAST	P20810	708 aa	Known RBP	3.05	□□□□□ -1.92
CNOT2-222	ENST00000550155	KRT83	P78385	493 aa		3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms