RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 C19orf57Q0VDD7 668 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 PDCD2Q16342 344 aaPredicted RBP18.03■□□□□ 0.48
DDX54-207ENST00000550016 SPRED3Q2MJR0 410 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 ATP6AP1LQ52LC2 224 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 DGAT2L6Q6ZPD8 337 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 IKBIPQ70UQ0 350 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 RPS19BP1Q86WX3 136 aaKnown RBP18.03■□□□□ 0.48
DDX54-207ENST00000550016 LGI4Q8N135 537 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 CDC26Q8NHZ8 85 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 ZNF721Q8TF20 911 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 HAS2Q92819 552 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 ART5Q96L15 291 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 MFRPQ9BY79 579 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 CDCP1Q9H5V8 836 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 COPS7AQ9UBW8 275 aa18.03■□□□□ 0.48
DDX54-207ENST00000550016 ZNF223Q9UK11 482 aaPredicted RBP18.03■□□□□ 0.48
DDX54-207ENST00000550016 DYTNA2CJ06 578 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 JUNP05412 331 aaKnown RBP18.02■□□□□ 0.48
DDX54-207ENST00000550016 DDCP20711 480 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 TACR1P25103 407 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 FEN1P39748 380 aaKnown RBP18.02■□□□□ 0.48
DDX54-207ENST00000550016 ZNF750Q32MQ0 723 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 NADK2Q4G0N4 442 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 C6orf136Q5SQH8 315 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 HSDL2Q6YN16 418 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 SAMD14Q8IZD0 417 aaPredicted RBP18.02■□□□□ 0.48
DDX54-207ENST00000550016 ARMC10Q8N2F6 343 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 ZNF321PQ8N8H1 164 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 TUBGCP3Q96CW5 907 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 FBXL20Q96IG2 436 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 ZNF681Q96N22 645 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 NPAS2Q99743 824 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 RNF32Q9H0A6 362 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 CXorf21Q9HAI6 301 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 PLA2G3Q9NZ20 509 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 ABI3Q9P2A4 366 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 GIMAP2Q9UG22 337 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 HEMK1Q9Y5R4 338 aaPredicted RBP18.02■□□□□ 0.48
DDX54-207ENST00000550016 CFAP46Q8IYW2 2715 aa18.02■□□□□ 0.48
DDX54-207ENST00000550016 IGKV3-11P04433 115 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 BCKDHAP12694 445 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 SDC1P18827 310 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 MAPK1P28482 360 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 HK2P52789 917 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 MLF1P58340 268 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 ERVK-8P63133 956 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 ARG2P78540 354 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 OCRLQ01968 901 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 ZNF267Q14586 743 aaPredicted RBP18.01■□□□□ 0.47
DDX54-207ENST00000550016 SLC6A19Q695T7 634 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 BEST3Q8N1M1 668 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 OR8K3Q8NH51 312 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 DOK4Q8TEW6 326 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 EXOSC8Q96B26 276 aaKnown RBP18.01■□□□□ 0.47
DDX54-207ENST00000550016 CNRIP1Q96F85 164 aaPredicted RBP18.01■□□□□ 0.47
DDX54-207ENST00000550016 EGLN2Q96KS0 407 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 MIEF1Q9NQG6 463 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 SLC35C2Q9NQQ7 365 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 GIMAP4Q9NUV9 329 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 INTS9Q9NV88 658 aaKnown RBP18.01■□□□□ 0.47
DDX54-207ENST00000550016 TAS2R7Q9NYW3 318 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 EXO1Q9UQ84 846 aaKnown RBP18.01■□□□□ 0.47
DDX54-207ENST00000550016 ERVK-19Q9WJR5 959 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 B3GNT3Q9Y2A9 372 aa18.01■□□□□ 0.47
DDX54-207ENST00000550016 HRKO00198 91 aa18■□□□□ 0.47
DDX54-207ENST00000550016 CDK2AP1O14519 115 aa18■□□□□ 0.47
DDX54-207ENST00000550016 SUV39H1O43463 412 aa18■□□□□ 0.47
DDX54-207ENST00000550016 MAN1A2O60476 641 aa18■□□□□ 0.47
DDX54-207ENST00000550016 WDPCPO95876 746 aa18■□□□□ 0.47
DDX54-207ENST00000550016 ATP1B1P05026 303 aa18■□□□□ 0.47
DDX54-207ENST00000550016 NT5EP21589 574 aa18■□□□□ 0.47
DDX54-207ENST00000550016 ASMTP46597 345 aa18■□□□□ 0.47
DDX54-207ENST00000550016 SMU1Q2TAY7 513 aa18■□□□□ 0.47
DDX54-207ENST00000550016 PLEKHN1Q494U1 663 aaPredicted RBP18■□□□□ 0.47
DDX54-207ENST00000550016 C6orf163Q5TEZ5 329 aa18■□□□□ 0.47
DDX54-207ENST00000550016 Q6ZS92 163 aa18■□□□□ 0.47
DDX54-207ENST00000550016 TICAM1Q8IUC6 712 aa18■□□□□ 0.47
DDX54-207ENST00000550016 GALNT12Q8IXK2 581 aa18■□□□□ 0.47
DDX54-207ENST00000550016 LRRC25Q8N386 305 aaPredicted RBP18■□□□□ 0.47
DDX54-207ENST00000550016 FNDC5Q8NAU1 212 aa18■□□□□ 0.47
DDX54-207ENST00000550016 THAP3Q8WTV1 239 aaPredicted RBP18■□□□□ 0.47
DDX54-207ENST00000550016 DYDC1Q8WWB3 177 aa18■□□□□ 0.47
DDX54-207ENST00000550016 PNPLA2Q96AD5 504 aa18■□□□□ 0.47
DDX54-207ENST00000550016 PPP1R36Q96LQ0 422 aa18■□□□□ 0.47
DDX54-207ENST00000550016 CNPPD1Q9BV87 410 aa18■□□□□ 0.47
DDX54-207ENST00000550016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18■□□□□ 0.47
DDX54-207ENST00000550016 BAIAP2L1Q9UHR4 511 aa18■□□□□ 0.47
DDX54-207ENST00000550016 EML6Q6ZMW3 1958 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 SLCO1B7G3V0H7 640 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 FCHO1O14526 889 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 PRKNO60260 465 aaPredicted RBP17.99■□□□□ 0.47
DDX54-207ENST00000550016 VPS4BO75351 444 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 PRPS2P11908 318 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 RNF4P78317 190 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 EMX2Q04743 252 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 DUSP2Q05923 314 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 MAP4K2Q12851 820 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 MAD2L1Q13257 205 aaPredicted RBP17.99■□□□□ 0.47
DDX54-207ENST00000550016 COLEC12Q5KU26 742 aa17.99■□□□□ 0.47
DDX54-207ENST00000550016 IL23RQ5VWK5 629 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms