RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 RPLP0P6Q8NHW5 317 aa14.27□□□□□ -0.12
CUX1-214ENST00000550008 CPPED1Q9BRF8 314 aaPredicted RBP14.27□□□□□ -0.12
CUX1-214ENST00000550008 BTNL2Q9UIR0 455 aa14.27□□□□□ -0.12
CUX1-214ENST00000550008 CA14Q9ULX7 337 aa14.27□□□□□ -0.12
CUX1-214ENST00000550008 ENPP4Q9Y6X5 453 aa14.27□□□□□ -0.12
CUX1-214ENST00000550008 BLOC1S5-TXNDC5H3BN57 136 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 MAGEB3O15480 346 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 UGDHO60701 494 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 RPP14O95059 124 aaKnown RBP14.27□□□□□ -0.13
CUX1-214ENST00000550008 CXCL10P02778 98 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 IL12BP29460 328 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 GRK6P43250 576 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 TAS2R38P59533 333 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 MAP4K2Q12851 820 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 ZNF404Q494X3 552 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 XKR7Q5GH72 579 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 ZNF683Q8IZ20 524 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 OR9A2Q8NGT5 310 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 TGM7Q96PF1 710 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 PAPPA2Q9BXP8 1791 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 MVB12BQ9H7P6 319 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 MRPL39Q9NYK5 338 aaKnown RBP14.27□□□□□ -0.13
CUX1-214ENST00000550008 GDE1Q9NZC3 331 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 PCDHGB5Q9Y5G0 923 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 NPIPA5A0A0B4J1W7 369 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 NPIPA7E9PJI5 369 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 XKRYO14609 159 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 FHP07954 510 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 NPIPA8P0DM63 369 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 NFATC3Q12968 1075 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 ENPP2Q13822 863 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 GPR149Q86SP6 731 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 EID2BQ96D98 161 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 LRR1Q96L50 414 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 ZNF354BQ96LW1 612 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 DMRTB1Q96MA1 342 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 INSM2Q96T92 566 aaPredicted RBP14.27□□□□□ -0.13
CUX1-214ENST00000550008 MGLLQ99685 303 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 MAGIXQ9H6Y5 334 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 TMEM9Q9P0T7 183 aa14.27□□□□□ -0.13
CUX1-214ENST00000550008 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 ELOA3DA6NLF2 546 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 SOX30O94993 753 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 FCER2P06734 321 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 C7P10643 843 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 C21orf33P30042 268 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 SYPL1Q16563 259 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 ELOA3BQ3SY89 546 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 LEXMQ3ZCV2 418 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 FIGLAQ6QHK4 219 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 SLCO4C1Q6ZQN7 724 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 CSNK1A1LQ8N752 337 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 ELOA3Q8NG57 546 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 METTL21AQ8WXB1 218 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 ZNF300Q96RE9 604 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 BRD7Q9NPI1 651 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 APOBEC3BQ9UH17 382 aaKnown RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 MGAT4BQ9UQ53 548 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 C1orf226A1L170 272 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 KRBA1A5PL33 1030 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 J3QLW9 94 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 ZNF19P17023 458 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 RHCEP18577 417 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 TRAM2Q15035 370 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 TMEM240Q5SV17 173 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 C6orf132Q5T0Z8 1188 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 TMEM151AQ8N4L1 468 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 ACOT4Q8N9L9 421 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 OR52P1PQ8NH57 321 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 CD180Q99467 661 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 GORASP2Q9H8Y8 452 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 BRF2Q9HAW0 419 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 OLAHQ9NV23 265 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 CNIH4Q9P003 139 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 CFL2Q9Y281 166 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 CHST10O43529 356 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 ZNF829Q3KNS6 432 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 CPZQ66K79 652 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 TMC8Q8IU68 726 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 THAP3Q8WTV1 239 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 ZFAND2BQ8WV99 257 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 QRSL1Q9H0R6 528 aaKnown RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 NMNAT1Q9HAN9 279 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 TIGARQ9NQ88 270 aa14.26□□□□□ -0.13
CUX1-214ENST00000550008 PAK1IP1Q9NWT1 392 aaPredicted RBP14.26□□□□□ -0.13
CUX1-214ENST00000550008 EMC8O43402 210 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 ACPPP15309 386 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 MAOBP27338 520 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 FLYWCH1Q4VC44 716 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 COX20Q5RI15 118 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 DLEU7Q6UYE1 221 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 TRIM46Q7Z4K8 759 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 SLC22A16Q86VW1 577 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 MFSD2AQ8NA29 543 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 UBE2FQ969M7 185 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 PPT2Q9UMR5 302 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 FAM227AF5H4B4 570 aa14.25□□□□□ -0.13
CUX1-214ENST00000550008 SEMA4FO95754 770 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms