RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CD82P27701 267 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 STT3AP46977 705 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 SLC7A2P52569 658 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 TXNL4AP83876 142 aaKnown RBP16.32■□□□□ 0.2
LETMD1-220ENST00000549686 PRR5P85299 388 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 VAC14Q08AM6 782 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 RSPO4Q2I0M5 234 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-220ENST00000549686 SPDYE7PQ495Y7 208 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 MINDY4Q4G0A6 757 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 C6orf163Q5TEZ5 329 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 C6orf15Q6UXA7 325 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-220ENST00000549686 ZNF517Q6ZMY9 492 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-220ENST00000549686 ZNF551Q7Z340 670 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-220ENST00000549686 OR4N5Q8IXE1 308 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 PLPP5Q8NEB5 264 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 STT3BQ8TCJ2 826 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 MR1Q95460 341 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 RBM18Q96H35 190 aaKnown RBP16.32■□□□□ 0.2
LETMD1-220ENST00000549686 ZNF578Q96N58 590 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-220ENST00000549686 CDRT15Q96T59 188 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 THTPAQ9BU02 230 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 POLR1BQ9H9Y6 1135 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 C3orf14Q9HBI5 128 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 SLC25A37Q9NYZ2 338 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 ADA2Q9NZK5 511 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 PTGFRNQ9P2B2 879 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 ZNF292O60281 2723 aa16.32■□□□□ 0.2
LETMD1-220ENST00000549686 SPTBP11277 2137 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 A0A087WV62 115 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 CLIC1O00299 241 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 PCDH17O14917 1159 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 CDC123O75794 336 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-220ENST00000549686 DLGAP3O95886 979 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 GSNP06396 782 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 ZGLP1P0C6A0 271 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 SOAT1P35610 550 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 EEFSECP57772 596 aaKnown RBP16.31■□□□□ 0.2
LETMD1-220ENST00000549686 RHAGQ02094 409 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 ERV3-1Q14264 604 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 VWA2Q5GFL6 755 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 MFSD4BQ5TF39 518 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 FAM180BQ6P0A1 224 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 MRPL14Q6P1L8 145 aaKnown RBP16.31■□□□□ 0.2
LETMD1-220ENST00000549686 IGF2-ASQ6U949 168 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 MSRB3Q8IXL7 192 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 SLC15A3Q8IY34 581 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 ESX1Q8N693 406 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 OR56A1Q8NGH5 318 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 OR9A2Q8NGT5 310 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 ZFP90Q8TF47 636 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 PMEPA1Q969W9 287 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 TMEM125Q96AQ2 219 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 PTCHD1Q96NR3 888 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 DGAT2Q96PD7 388 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 CPPED1Q9BRF8 314 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-220ENST00000549686 SLC39A3Q9BRY0 314 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 SLC35A5Q9BS91 424 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 THUMPD3Q9BV44 507 aaKnown RBP16.31■□□□□ 0.2
LETMD1-220ENST00000549686 ALOXE3Q9BYJ1 711 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 CXorf36Q9H7Y0 433 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 TPT1P8Q9HAU6 139 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 SIRT3Q9NTG7 399 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-220ENST00000549686 CTSFQ9UBX1 484 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 PADI1Q9ULC6 663 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 SNX8Q9Y5X2 465 aa16.31■□□□□ 0.2
LETMD1-220ENST00000549686 SCN3AQ9NY46 2000 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 IGKV3D-11A0A0A0MRZ8 115 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 RNF103-CHMP3A0A140T963 221 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 A0A1W2PNU3 283 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 C9orf172C9J069 976 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 EMC8O43402 210 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 DYRK3O43781 588 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 JRKO75564 520 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 TNFSF15O95150 251 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 NQO1P15559 274 aaKnown RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 NT5EP21589 574 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 RBMS1P29558 406 aaKnown RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 CHI3L1P36222 383 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 CCT3P49368 545 aaKnown RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 CDK9P50750 372 aaKnown RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 ANXA11P50995 505 aaKnown RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 BTG2P78543 158 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 GAB1Q13480 694 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 COL9A2Q14055 689 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-220ENST00000549686 NKG7Q16617 165 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 ZNF750Q32MQ0 723 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 GTDC1Q4AE62 458 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 FBXW8Q8N3Y1 598 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 GALNT6Q8NCL4 622 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 ELP4Q96EB1 424 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 NEURL3Q96EH8 262 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 ECSITQ9BQ95 431 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 SPATA9Q9BWV2 254 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 SPRY4Q9C004 299 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 CHST8Q9H2A9 424 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 SLC6A13Q9NSD5 602 aa16.3■□□□□ 0.2
LETMD1-220ENST00000549686 NTMQ9P121 344 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms