RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MYOTQ9UBF9 498 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 OPTCQ9UBM4 332 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 VTI1BQ9UEU0 232 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 LIPGQ9Y5X9 500 aa11.25□□□□□ -0.61
DDX54-206ENST00000549271 A0A1W2PPR1 153 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 PINLYPA6NC86 204 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 SYCE1LA8MT33 242 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 A8MVJ9 347 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 FAM47E-STBD1D6RA91 191 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 POC1B-GALNT4F8VUJ3 575 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 GLSO94925 669 aaPredicted RBP11.24□□□□□ -0.61
DDX54-206ENST00000549271 INHBAP08476 426 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 GCAP28676 217 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 PPP2R1BP30154 601 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 MSH2P43246 934 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 SERPINB9P50453 376 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 ASCL1P50553 236 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 PLA2G16P53816 162 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 LIM2P55344 173 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 PPIAP62937 165 aaKnown RBP11.24□□□□□ -0.61
DDX54-206ENST00000549271 SLC13A2Q13183 592 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 SETDB1Q15047 1291 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 PFKFB4Q16877 469 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 TECRLQ5HYJ1 363 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 C1orf185Q5T7R7 199 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 TRIM40Q6P9F5 258 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 ABHD17CQ6PCB6 329 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 HSDL2Q6YN16 418 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 C16orf47Q6ZP98 133 aaPredicted RBP11.24□□□□□ -0.61
DDX54-206ENST00000549271 IFT20Q8IY31 132 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 LAS2Q8IYD9 372 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 VWA5B2Q8N398 1253 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 TEX9Q8N6V9 391 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 OR2M7Q8NG81 312 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 ZNF473Q8WTR7 871 aaKnown RBP11.24□□□□□ -0.61
DDX54-206ENST00000549271 DAZLQ92904 295 aaKnown RBP11.24□□□□□ -0.61
DDX54-206ENST00000549271 Q96MF0 132 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 RASL10BQ96S79 203 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 TXLNGYQ9BZA5 131 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 REXO4Q9GZR2 422 aaKnown RBP11.24□□□□□ -0.61
DDX54-206ENST00000549271 VPS11Q9H270 941 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 HPF1Q9NWY4 346 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 KCMF1Q9P0J7 381 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 ZNF180Q9UJW8 692 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 ERVK-11Q9UQG0 969 aa11.24□□□□□ -0.61
DDX54-206ENST00000549271 A0A087WUV0 522 aaPredicted RBP11.23□□□□□ -0.61
DDX54-206ENST00000549271 CLCA1A8K7I4 914 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 FAM166BA8MTA8 275 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 TRIM49D1C9J1S8 452 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 ACOT7O00154 380 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 AQP7O14520 342 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 OR2J2O76002 312 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 OR6B1O95007 311 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 FAM153BP0C7A2 387 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 RHOXF2BP0C7M4 288 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 EPB42P16452 691 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 ALDH18A1P54886 795 aaKnown RBP11.23□□□□□ -0.61
DDX54-206ENST00000549271 MTTPP55157 894 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 HIST2H2ACQ16777 129 aaPredicted RBP11.23□□□□□ -0.61
DDX54-206ENST00000549271 HYAL4Q2M3T9 481 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 FAM153CQ494X1 144 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 PAGE2BQ5JRK9 111 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 NDUFAF5Q5TEU4 345 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 HIST2H2AA3Q6FI13 130 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 SLC22A16Q86VW1 577 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 P3H2Q8IVL5 708 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 GOLM1Q8NBJ4 401 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 OR7G3Q8NG95 312 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 OR14A16Q8NHC5 309 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 PTPMT1Q8WUK0 201 aaPredicted RBP11.23□□□□□ -0.61
DDX54-206ENST00000549271 ASB15Q8WXK1 588 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 TRIM44Q96DX7 344 aaPredicted RBP11.23□□□□□ -0.61
DDX54-206ENST00000549271 SGCZQ96LD1 299 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 RHOXF2Q9BQY4 288 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 MS4A8Q9BY19 250 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 ROGDIQ9GZN7 287 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 LYRM4Q9HD34 91 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 RYDENQ9NUL5 291 aaKnown RBP11.23□□□□□ -0.61
DDX54-206ENST00000549271 FOXD3Q9UJU5 478 aaPredicted RBP11.23□□□□□ -0.61
DDX54-206ENST00000549271 CLCA3PQ9Y6N3 262 aa11.23□□□□□ -0.61
DDX54-206ENST00000549271 TRIM64A6NGJ6 449 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 TUBAL3A6NHL2 446 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 TRIM64BA6NI03 449 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 SIX3O95343 332 aaPredicted RBP11.22□□□□□ -0.61
DDX54-206ENST00000549271 HRGP04196 525 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 ABHD2P08910 425 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 GFAPP14136 432 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 CNR1P21554 472 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 CERS1P27544 350 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 SOX3P41225 446 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 HK2P52789 917 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 TGM3Q08188 693 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 SERTAD2Q14140 314 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 GRHL2Q6ISB3 625 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 MED27Q6P2C8 311 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 KLC3Q6P597 504 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 IL20RBQ6UXL0 311 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 ZNF793Q6ZN11 406 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms