RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 GFRALQ6UXV0 394 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 CPSF7Q8N684 471 aaKnown RBP14.64□□□□□ -0.07
DDX54-205ENST00000548786 OR4K14Q8NGD5 310 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 CHTF18Q8WVB6 975 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 TM4SF18Q96CE8 201 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 RASL10BQ96S79 203 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 SMC6Q96SB8 1091 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 ROPN1BQ9BZX4 212 aaPredicted RBP14.64□□□□□ -0.07
DDX54-205ENST00000548786 CENPHQ9H3R5 247 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 ROPN1Q9HAT0 212 aaPredicted RBP14.64□□□□□ -0.07
DDX54-205ENST00000548786 MYOTQ9UBF9 498 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 YARS2Q9Y2Z4 477 aaKnown RBP14.64□□□□□ -0.07
DDX54-205ENST00000548786 PTGDR2Q9Y5Y4 395 aa14.64□□□□□ -0.07
DDX54-205ENST00000548786 HIVEP3Q5T1R4 2406 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 CLEC18AA5D8T8 446 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 A8MVJ9 347 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 ZNHIT1O43257 154 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 ZNF354AO60765 605 aaPredicted RBP14.63□□□□□ -0.07
DDX54-205ENST00000548786 IL3P08700 152 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 HSD3B1P14060 373 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 NT5EP21589 574 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 HSD3B2P26439 372 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 ALDH3A1P30838 453 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 SSTR4P31391 388 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 DEKP35659 375 aaKnown RBP14.63□□□□□ -0.07
DDX54-205ENST00000548786 RAE1P78406 368 aaKnown RBP14.63□□□□□ -0.07
DDX54-205ENST00000548786 ACSM2AQ08AH3 577 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 ACSM2BQ68CK6 577 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 CLEC18BQ6UXF7 455 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 RNF111Q6ZNA4 994 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 ZCCHC23Q6ZST2 131 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 ARMC10Q8N2F6 343 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 MREGQ8N565 214 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 GBP7Q8N8V2 638 aaPredicted RBP14.63□□□□□ -0.07
DDX54-205ENST00000548786 CLEC18CQ8NCF0 446 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 TCP10LQ8TDR4 215 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 KLHL29Q96CT2 875 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 FBXL20Q96IG2 436 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 FRMD6Q96NE9 622 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 GATA5Q9BWX5 397 aaPredicted RBP14.63□□□□□ -0.07
DDX54-205ENST00000548786 PFDN4Q9NQP4 134 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 HPF1Q9NWY4 346 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 MKS1Q9NXB0 559 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 SEC14L3Q9UDX4 400 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 MID2Q9UJV3 735 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 PCDHA9Q9Y5H5 950 aa14.63□□□□□ -0.07
DDX54-205ENST00000548786 USP9YO00507 2555 aaPredicted RBP14.62□□□□□ -0.07
DDX54-205ENST00000548786 NPIPA5E9PKD4 350 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 GUCY1B2O75343 617 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 IGKV3-11P04433 115 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 CT62P0C5K7 136 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 SLC35E2P0CK97 266 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 MEOX1P50221 254 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 ALDH6A1Q02252 535 aaKnown RBP14.62□□□□□ -0.07
DDX54-205ENST00000548786 RNFT1Q5M7Z0 435 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 SLC48A1Q6P1K1 146 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 GALNT12Q8IXK2 581 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 FAM98AQ8NCA5 519 aaKnown RBP14.62□□□□□ -0.07
DDX54-205ENST00000548786 OR5L2Q8NGL0 311 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 AGR3Q8TD06 166 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 ART5Q96L15 291 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 PELOQ9BRX2 385 aaKnown RBP14.62□□□□□ -0.07
DDX54-205ENST00000548786 FAIM2Q9BWQ8 316 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 HEY2Q9UBP5 337 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 MCM8Q9UJA3 840 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 SH3BGRL2Q9UJC5 107 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 ERRFI1Q9UJM3 462 aaPredicted RBP14.62□□□□□ -0.07
DDX54-205ENST00000548786 RAB21Q9UL25 225 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 NPIPA1Q9UND3 350 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 DLGAP4Q9Y2H0 992 aa14.62□□□□□ -0.07
DDX54-205ENST00000548786 SPTAN1Q13813 2472 aaKnown RBP14.61□□□□□ -0.07
DDX54-205ENST00000548786 A0A0G2JMM0 328 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 A0A1W2PPB8 328 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 A0A1W2PRS3 328 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 C1orf226A1L170 272 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 KIR3DP1A8MWS1 328 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 TMEM233B4DJY2 109 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 RGS16O15492 202 aaPredicted RBP14.61□□□□□ -0.07
DDX54-205ENST00000548786 TRIM13O60858 407 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 CLPSP04118 112 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 CHRNGP07510 517 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 CPMP14384 443 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 PORP16435 677 aaPredicted RBP14.61□□□□□ -0.07
DDX54-205ENST00000548786 ZNF24P17028 368 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 TIA1P31483 386 aaKnown RBP eCLIP14.61□□□□□ -0.07
DDX54-205ENST00000548786 DUSP2Q05923 314 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 BIKQ13323 160 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 LTB4RQ15722 352 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 SPRED3Q2MJR0 410 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 SPIN4Q56A73 249 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 C6orf163Q5TEZ5 329 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 C1QL3Q5VWW1 255 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 TMEM64Q6YI46 380 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 SLC29A4Q7RTT9 530 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 ZGRF1Q86YA3 2104 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 SULF2Q8IWU5 870 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 ADCY4Q8NFM4 1077 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 DNAJB8Q8NHS0 232 aa14.61□□□□□ -0.07
DDX54-205ENST00000548786 EXOSC8Q96B26 276 aaKnown RBP14.61□□□□□ -0.07
DDX54-205ENST00000548786 BRINP2Q9C0B6 783 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms