RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 PLEKHF2Q9H8W4 249 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 CAB39LQ9H9S4 337 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 ACKR4Q9NPB9 350 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 PRDM7Q9NQW5 492 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 MS4A12Q9NXJ0 267 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 MOCS1Q9NZB8 636 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 PHF11Q9UIL8 331 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 FOXD3Q9UJU5 478 aaPredicted RBP8.59□□□□□ -1.03
LETMD1-217ENST00000548516 SLC6A5Q9Y345 797 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 ANGPTL3Q9Y5C1 460 aa8.59□□□□□ -1.03
LETMD1-217ENST00000548516 FN1P02751 2386 aaKnown RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 IQANK1A0A1B0GTG1 560 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 LRRC3CA6NJW4 275 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 HRKO00198 91 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 SAP18O00422 153 aaKnown RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 CASKO14936 926 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 TAPBPO15533 448 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 FGF17O60258 216 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 TBX6O95947 436 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 TGFB1P01137 390 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 CD1DP15813 335 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 HIST1H1TP22492 207 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ATP5A1P25705 553 aaKnown RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 SERPINB3P29508 390 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 CEACAM8P31997 349 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 GP5P40197 560 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 BUD31P41223 144 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ZNF136P52737 540 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 RAB10P61026 200 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 BIKQ13323 160 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 DDX39BQ13838 428 aaKnown RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ZNF267Q14586 743 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 TBCCQ15814 346 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 C6orf163Q5TEZ5 329 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ADGRD1Q6QNK2 874 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ZNF793Q6ZN11 406 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 DGAT2L6Q6ZPD8 337 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 TBC1D1Q86TI0 1168 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 LACC1Q8IV20 430 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 CTAGE3PQ8IX95 158 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 C9orf40Q8IXQ3 194 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 LRRC25Q8N386 305 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 SLC15A4Q8N697 577 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ACOT4Q8N9L9 421 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 NUBPLQ8TB37 319 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 STAG3L4Q8TBR4 150 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 PAQR8Q8TEZ7 354 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 WDR34Q96EX3 536 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 TIMP4Q99727 224 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 MS4A8Q9BY19 250 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 CD244Q9BZW8 370 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 RPF2Q9H7B2 306 aaKnown RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 PROK2Q9HC23 129 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 SAYSD1Q9NPB0 183 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 RYDENQ9NUL5 291 aaKnown RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 NUDT4Q9NZJ9 180 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 CNIH4Q9P003 139 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 OPTCQ9UBM4 332 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ZNF629Q9UEG4 869 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ADGRE2Q9UHX3 823 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 ZNF490Q9ULM2 529 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 MTO1Q9Y2Z2 717 aaKnown RBP8.58□□□□□ -1.04
LETMD1-217ENST00000548516 SAR1BQ9Y6B6 198 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 CSPG4Q6UVK1 2322 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 FBN3Q75N90 2809 aa8.58□□□□□ -1.04
LETMD1-217ENST00000548516 SYCE1LA8MT33 242 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 CAPN14A8MX76 684 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 E7ESA3 106 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 H7C1Q1 480 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 ARHGEF9O43307 516 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 PRAMEF4O60810 478 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 PIAS1O75925 651 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 HEXAP06865 529 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 ALOX15P16050 662 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-217ENST00000548516 EPB42P16452 691 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 CD53P19397 219 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 CTSSP25774 331 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 SPRP35270 261 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-217ENST00000548516 TIMP3P35625 211 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 ARL1P40616 181 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-217ENST00000548516 RPL21P46778 160 aaKnown RBP8.57□□□□□ -1.04
LETMD1-217ENST00000548516 STT3AP46977 705 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 CPA2P48052 419 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 MASP1P48740 699 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 GNG11P61952 73 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 HERVK_113P63132 956 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 ERVK-8P63133 956 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 TNFRSF17Q02223 184 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 CRYZQ08257 329 aaKnown RBP8.57□□□□□ -1.04
LETMD1-217ENST00000548516 SLAMF1Q13291 335 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 SF3B4Q15427 424 aaKnown RBP eCLIP8.57□□□□□ -1.045e-7■■■□□ 17.5
LETMD1-217ENST00000548516 OR4D1Q15615 310 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 FBXL19-AS1Q494R0 122 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 PRAMEF9Q5VWM5 478 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 KHDRBS2Q5VWX1 349 aaKnown RBP8.57□□□□□ -1.04
LETMD1-217ENST00000548516 SHEQ5VZ18 495 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 BICRALQ6AI39 1079 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 POMZP3Q6PJE2 187 aa8.57□□□□□ -1.04
LETMD1-217ENST00000548516 CYP20A1Q6UW02 462 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms