RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 DMRTC2Q8IXT2 367 aaPredicted RBP12.13□□□□□ -0.47
NR4A1-209ENST00000548232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.13□□□□□ -0.47
NR4A1-209ENST00000548232 TMEM132CQ8N3T6 1108 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 CCDC63Q8NA47 563 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 NRGNQ92686 78 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 GAL3ST3Q96A11 431 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 MS4A6EQ96DS6 147 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 NPLQ9BXD5 320 aaPredicted RBP12.13□□□□□ -0.47
NR4A1-209ENST00000548232 ERVK-6Q9BXR3 956 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 CD244Q9BZW8 370 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 OR8D2Q9GZM6 311 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 WWOXQ9NZC7 414 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 MYOTQ9UBF9 498 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 TNFRSF10DQ9UBN6 386 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 ZNF225Q9UK10 706 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
NR4A1-209ENST00000548232 A0A088AWK7 358 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ATP6AP2A0A1C7CYW4 349 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 TMEM200CA6NKL6 621 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 OR7A17O14581 309 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 CLGNO14967 610 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 BIRC5O15392 142 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ITM2AO43736 263 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 LYPLA1O75608 230 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ATP6AP2O75787 350 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 CHRNGP07510 517 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 HOXD4P09016 255 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-209ENST00000548232 IGFBP2P18065 325 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 CD22P20273 847 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 IMPDH1P20839 514 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ZNF10P21506 573 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-209ENST00000548232 CNR1P21554 472 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ACVR2AP27037 513 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 MSX1P28360 303 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 HNMTP50135 292 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 GPR143P51810 404 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 NAGLUP54802 743 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 CDH13P55290 713 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 TFF3Q07654 80 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ELAVL1Q15717 326 aaKnown RBP12.12□□□□□ -0.47
NR4A1-209ENST00000548232 CHI3L2Q15782 390 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 GOLGA7Q7Z5G4 137 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 GPALPP1Q8IXQ4 340 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ZNF595Q8IYB9 648 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 CLYBLQ8N0X4 340 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 KRT78Q8N1N4 520 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 TTLQ8NG68 377 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 RASL10BQ96S79 203 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 SORT1Q99523 831 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ALOXE3Q9BYJ1 711 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 TTTY12Q9BZ98 90 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 REXO4Q9GZR2 422 aaKnown RBP12.12□□□□□ -0.47
NR4A1-209ENST00000548232 LDAHQ9H6V9 325 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 EXO5Q9H790 373 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 COPS7BQ9H9Q2 264 aaPredicted RBP12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ADAP2Q9NPF8 381 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 NKIRAS1Q9NYS0 192 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 ACAD8Q9UKU7 415 aa12.12□□□□□ -0.47
NR4A1-209ENST00000548232 PPIEQ9UNP9 301 aaKnown RBP12.12□□□□□ -0.47
NR4A1-209ENST00000548232 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 TRIM13O60858 407 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 CTNSO60931 367 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 SMIM24O75264 130 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 TAC1P20366 129 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 CERS1P27544 350 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 LIM2P55344 173 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 GUCY1A3Q02108 690 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 BST1Q10588 318 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 TRAF3Q13114 568 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 E2F2Q14209 437 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 PDK4Q16654 411 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 TTC19Q6DKK2 380 aaPredicted RBP12.11□□□□□ -0.47
NR4A1-209ENST00000548232 TRIM40Q6P9F5 258 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 RTL4Q6ZR62 310 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 RGS9BPQ6ZS82 235 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 GK5Q6ZS86 529 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 FRMD7Q6ZUT3 714 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 FAM47EQ6ZV65 393 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 LRRC70Q7Z2Q7 622 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 TCAIMQ8N3R3 496 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 TMEM251Q8N6I4 163 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 ZNF321PQ8N8H1 164 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 SNX31Q8N9S9 440 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 OR52B6Q8NGF0 335 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 FAM76AQ8TAV0 307 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 CKAP2Q8WWK9 683 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 DAZLQ92904 295 aaKnown RBP12.11□□□□□ -0.47
NR4A1-209ENST00000548232 QRFPRQ96P65 431 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 F2RL3Q96RI0 385 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 SERINC2Q96SA4 455 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 CSF3RQ99062 836 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 PAIP2Q9BPZ3 127 aaKnown RBP12.11□□□□□ -0.47
NR4A1-209ENST00000548232 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 TTYH2Q9BSA4 534 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 INTS9Q9NV88 658 aaKnown RBP12.11□□□□□ -0.47
NR4A1-209ENST00000548232 KCNN3Q9UGI6 736 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 MID2Q9UJV3 735 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 CLDN16Q9Y5I7 305 aa12.11□□□□□ -0.47
NR4A1-209ENST00000548232 LIPGQ9Y5X9 500 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms