RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ERVK-19Q9WJR5 959 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 TRAF6Q9Y4K3 522 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 DNAJC15Q9Y5T4 150 aa17.4■□□□□ 0.38
PRPF40B-206ENST00000547764 WDR91A4D1P6 747 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 TMEM233B4DJY2 109 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 TCP11X1B4DZS4 312 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 WWP2O00308 870 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 SLC28A1O00337 649 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 TM9SF1O15321 606 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 ERAL1O75616 437 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 ANXA4P09525 319 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 CPMP14384 443 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 HLCSP50747 726 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 HK2P52789 917 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 ZNF227Q86WZ6 799 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 CLYBLQ8N0X4 340 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 HORMAD2Q8N7B1 307 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 TAAR6Q96RI8 345 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 HES7Q9BYE0 225 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 CXorf21Q9HAI6 301 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 AGPAT4Q9NRZ5 378 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 PSME2Q9UL46 239 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 YARS2Q9Y2Z4 477 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 PCDHGB6Q9Y5F9 930 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 MYO18BQ8IUG5 2567 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 TENM4Q6N022 2769 aa17.39■□□□□ 0.37
PRPF40B-206ENST00000547764 GOLGA6L10A6NI86 522 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 OR2J2O76002 312 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 ZWINTO95229 277 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 CHEK2O96017 543 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 DHRS4L1P0CG22 281 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 DRD2P14416 443 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 CD46P15529 392 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 PORP16435 677 aaPredicted RBP17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 FEN1P39748 380 aaKnown RBP17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 UQCRFS1P47985 274 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 SSR4P51571 173 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 INAQ16352 499 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 UGT3A2Q3SY77 523 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 SH2D4BQ5SQS7 431 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 CES4AQ5XG92 561 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 FAM180BQ6P0A1 224 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 FAM180AQ6UWF9 173 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 RNF165Q6ZSG1 346 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 Q6ZSR9 355 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 C9orf40Q8IXQ3 194 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 TMEM156Q8N614 296 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 OR5L2Q8NGL0 311 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 OR2T11Q8NH01 316 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 AGR3Q8TD06 166 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 FAR1Q8WVX9 515 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 KLHL29Q96CT2 875 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 SCMH1Q96GD3 660 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 C5orf34Q96MH7 638 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 STMN4Q9H169 189 aaPredicted RBP17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 CLMPQ9H6B4 373 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 KLHL1Q9NR64 748 aa17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 POLR3HQ9Y535 204 aaPredicted RBP17.38■□□□□ 0.37
PRPF40B-206ENST00000547764 RELNP78509 3460 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 NPIPB8E9PQR5 432 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 BIRC5O15392 142 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 RGS14O43566 566 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 SEC22BO75396 215 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 SLC25A12O75746 678 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 RASAL1O95294 804 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 CLPSP04118 112 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 SP1P08047 785 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 CT62P0C5K7 136 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 LINC00032P0C843 101 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 CSNK2A2P19784 350 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 NT5EP21589 574 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 GNLYP22749 145 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 PRPH2P23942 346 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 GSTM5P46439 218 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 ZNF763Q0D2J5 394 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 CASP8Q14790 479 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 HEPACAMQ14CZ8 416 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 KIAA0040Q15053 153 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 NR6A1Q15406 480 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 SLC25A25Q6KCM7 469 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 HOMEZQ8IX15 550 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 GALNT12Q8IXK2 581 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 BCORP1Q8N888 145 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 PPP1R14CQ8TAE6 165 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 FAM76AQ8TAV0 307 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 TWIST2Q8WVJ9 160 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 CNRIP1Q96F85 164 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 RASL10BQ96S79 203 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 LRTM1Q9HBL6 345 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 TMBIM4Q9HC24 238 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 C1orf109Q9NX04 203 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 UTS2RQ9UKP6 389 aa17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 UBR5O95071 2799 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-206ENST00000547764 SSTR4P31391 388 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 SLC37A1P57057 533 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 DUSP2Q05923 314 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 FUT7Q11130 342 aa17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 MRPL49Q13405 166 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-206ENST00000547764 CHI3L2Q15782 390 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms