RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 MFRPQ9BY79 579 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 TUBB1Q9H4B7 451 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 SLC35C2Q9NQQ7 365 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 B3GNT3Q9Y2A9 372 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 FER1L5A0AVI2 2057 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 CELSR3Q9NYQ7 3312 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 TRAV17A0A0B4J275 112 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 TTLL8A6PVC2 850 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 B8ZZF3 427 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 CELA2AP08217 269 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 LBPP18428 481 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 ERVK-8P63133 956 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 SPRED3Q2MJR0 410 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 RFTN2Q52LD8 501 aaPredicted RBP16.3■□□□□ 0.2
CD9-211ENST00000546073 IL23RQ5VWK5 629 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 PCSK4Q6UW60 755 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 ATG14Q6ZNE5 492 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 PRICKLE2Q7Z3G6 844 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 TICAM1Q8IUC6 712 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 LRRC34Q8IZ02 419 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 FAM98AQ8NCA5 519 aaKnown RBP16.3■□□□□ 0.2
CD9-211ENST00000546073 NFAM1Q8NET5 270 aaPredicted RBP16.3■□□□□ 0.2
CD9-211ENST00000546073 OR7G1Q8NGA0 311 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 PIWIL2Q8TC59 973 aaKnown RBP16.3■□□□□ 0.2
CD9-211ENST00000546073 SLC22A8Q8TCC7 542 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 HAS2Q92819 552 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 PNPLA2Q96AD5 504 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 MTERF3Q96E29 417 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 C5orf34Q96MH7 638 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 NUF2Q9BZD4 464 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 RNF32Q9H0A6 362 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 REEP4Q9H6H4 257 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 SH3BP4Q9P0V3 963 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 BCAP29Q9UHQ4 241 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 PPIEQ9UNP9 301 aaKnown RBP16.3■□□□□ 0.2
CD9-211ENST00000546073 ERVK-19Q9WJR5 959 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 YARS2Q9Y2Z4 477 aaKnown RBP16.3■□□□□ 0.2
CD9-211ENST00000546073 PTGDR2Q9Y5Y4 395 aa16.3■□□□□ 0.2
CD9-211ENST00000546073 OR5H15A6NDH6 313 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 CAPN14A8MX76 684 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 SASH3O75995 380 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 SLITRK5O94991 958 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 ATP1B1P05026 303 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 CD46P15529 392 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 GPC1P35052 558 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 CYB561P49447 251 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 SSR4P51571 173 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 NRG3P56975 720 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 EMX2Q04743 252 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 XKR7Q5GH72 579 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 C6orf136Q5SQH8 315 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 B3GNTL1Q67FW5 361 aaPredicted RBP16.29■□□□□ 0.2
CD9-211ENST00000546073 FCRLBQ6BAA4 426 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 NXNQ6DKJ4 435 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 FAM71E1Q6IPT2 247 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 H3F3CQ6NXT2 135 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 ACAD11Q709F0 780 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 ZNF605Q86T29 641 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 CCDC116Q8IYX3 515 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 TAGAPQ8N103 731 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 VWA5B2Q8N398 1253 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 LIX1Q8N485 282 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 OR2T11Q8NH01 316 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 THAP3Q8WTV1 239 aaPredicted RBP16.29■□□□□ 0.2
CD9-211ENST00000546073 ASB15Q8WXK1 588 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 TSSK3Q96PN8 268 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 ZNF395Q9H8N7 513 aaPredicted RBP16.29■□□□□ 0.2
CD9-211ENST00000546073 PNPOQ9NVS9 261 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 MARCOQ9UEW3 520 aaPredicted RBP16.29■□□□□ 0.2
CD9-211ENST00000546073 PRODH2Q9UF12 536 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 HAO1Q9UJM8 370 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 ERVK-11Q9UQG0 969 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 CCL27Q9Y4X3 112 aa16.29■□□□□ 0.2
CD9-211ENST00000546073 ZZEF1O43149 2961 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 GABRR3A8MPY1 467 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 TGFBR3LH3BV60 316 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 AKAP10O43572 662 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 SNNO75324 88 aaPredicted RBP16.28■□□□□ 0.2
CD9-211ENST00000546073 BCKDHAP12694 445 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 PRPS1L1P21108 318 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 SOX11P35716 441 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 NCBP2P52298 156 aaKnown RBP eCLIP16.28■□□□□ 0.2
CD9-211ENST00000546073 RNF4P78317 190 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 ZNF169Q14929 603 aaPredicted RBP16.28■□□□□ 0.2
CD9-211ENST00000546073 KIAA0040Q15053 153 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 IGFL2Q6UWQ7 119 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 GPALPP1Q8IXQ4 340 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 BEST3Q8N1M1 668 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 KIF2BQ8N4N8 673 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 APCDD1LQ8NCL9 501 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 PSMF1Q92530 271 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 GFM2Q969S9 779 aaKnown RBP16.28■□□□□ 0.2
CD9-211ENST00000546073 ERP27Q96DN0 273 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 C11orf24Q96F05 449 aaPredicted RBP16.28■□□□□ 0.2
CD9-211ENST00000546073 ZBED6CLQ96FA7 236 aaPredicted RBP16.28■□□□□ 0.2
CD9-211ENST00000546073 BBC3Q96PG8 261 aaPredicted RBP16.28■□□□□ 0.2
CD9-211ENST00000546073 GAL3ST4Q96RP7 486 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 SORT1Q99523 831 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 C1orf50Q9BV19 199 aa16.28■□□□□ 0.2
CD9-211ENST00000546073 SEMA4CQ9C0C4 833 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms