RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 MPEG1Q2M385 716 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 FAM219BQ5XKK7 198 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 SLC48A1Q6P1K1 146 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 SCIMPQ6UWF3 145 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 GFRALQ6UXV0 394 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 RNF111Q6ZNA4 994 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 C16orf47Q6ZP98 133 aaPredicted RBP14.59□□□□□ -0.07
CCDC78-216ENST00000544996 DGAT2L6Q6ZPD8 337 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 SLC29A4Q7RTT9 530 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.59□□□□□ -0.07
CCDC78-216ENST00000544996 ZNF227Q86WZ6 799 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 HOMEZQ8IX15 550 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 GALNT12Q8IXK2 581 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 RASL10BQ96S79 203 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 SEC14L3Q9UDX4 400 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 ERVK-19Q9WJR5 959 aa14.59□□□□□ -0.07
CCDC78-216ENST00000544996 ASPDHA6ND91 283 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 OR6C76A6NM76 312 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 HRKO00198 91 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 RGS16O15492 202 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-216ENST00000544996 CPMP14384 443 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 DRD2P14416 443 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 PORP16435 677 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-216ENST00000544996 CSNK2A2P19784 350 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-216ENST00000544996 SOX3P41225 446 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 GSTM5P46439 218 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 TDGF1P3P51864 188 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 BTKQ06187 659 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 ZNF844Q08AG5 666 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 OPN5Q6U736 354 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 IL20RBQ6UXL0 311 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 TRIM46Q7Z4K8 759 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 POGLUT1Q8NBL1 392 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 SLC22A8Q8TCC7 542 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 TCP10LQ8TDR4 215 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 APIPQ96GX9 242 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 FRMD6Q96NE9 622 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 GATA5Q9BWX5 397 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-216ENST00000544996 SHCBP1LQ9BZQ2 653 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 CXorf21Q9HAI6 301 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 RRAGDQ9NQL2 400 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-216ENST00000544996 RYDENQ9NUL5 291 aaKnown RBP14.58□□□□□ -0.08
CCDC78-216ENST00000544996 SLC17A7Q9P2U7 560 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 OSGIN2Q9Y236 505 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 SLC5A6Q9Y289 635 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 ZNF780BQ9Y6R6 833 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 SHANK1Q9Y566 2161 aa14.58□□□□□ -0.08
CCDC78-216ENST00000544996 SEMA7AO75326 666 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 ERAL1O75616 437 aaKnown RBP14.57□□□□□ -0.08
CCDC78-216ENST00000544996 OR6B1O95007 311 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 UNC5CO95185 931 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 CHEK2O96017 543 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 ANXA4P09525 319 aaPredicted RBP14.57□□□□□ -0.08
CCDC78-216ENST00000544996 NT5EP21589 574 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 MST1P26927 711 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 SERPINB3P29508 390 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 ALDH3A1P30838 453 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 TIA1P31483 386 aaKnown RBP eCLIP14.57□□□□□ -0.08
CCDC78-216ENST00000544996 RBPJQ06330 500 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 HEPACAMQ14CZ8 416 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 KRTCAP3Q53RY4 240 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 PIGGQ5H8A4 983 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 GALNT18Q6P9A2 607 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 RTL4Q6ZR62 310 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 CROCCP2Q86T23 111 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 C9orf40Q8IXQ3 194 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 SAMD14Q8IZD0 417 aaPredicted RBP14.57□□□□□ -0.08
CCDC78-216ENST00000544996 DOK4Q8TEW6 326 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 SSC4DQ8WTU2 575 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 KLHL29Q96CT2 875 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 SGCZQ96LD1 299 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 GAL3ST4Q96RP7 486 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 EML4Q9HC35 981 aaKnown RBP14.57□□□□□ -0.08
CCDC78-216ENST00000544996 SIRT5Q9NXA8 310 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 CES1P1Q9UKY3 287 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 DLGAP4Q9Y2H0 992 aa14.57□□□□□ -0.08
CCDC78-216ENST00000544996 PEX1O43933 1283 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 NPHS1O60500 1241 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 RSL1D1O76021 490 aaKnown RBP14.56□□□□□ -0.08
CCDC78-216ENST00000544996 ZNF24P17028 368 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 FEN1P39748 380 aaKnown RBP14.56□□□□□ -0.08
CCDC78-216ENST00000544996 MEOX1P50221 254 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 SLC37A1P57057 533 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 KCNK10P57789 538 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 RAE1P78406 368 aaKnown RBP14.56□□□□□ -0.08
CCDC78-216ENST00000544996 SRSF11Q05519 484 aaKnown RBP14.56□□□□□ -0.08
CCDC78-216ENST00000544996 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.56□□□□□ -0.08
CCDC78-216ENST00000544996 HLA-DQA1Q5Y7H0 255 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 CLEC6AQ6EIG7 209 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 MDGA2Q7Z553 956 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 SULF2Q8IWU5 870 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 TAGAPQ8N103 731 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 MMP21Q8N119 569 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 CPSF7Q8N684 471 aaKnown RBP14.56□□□□□ -0.08
CCDC78-216ENST00000544996 SLC15A4Q8N697 577 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 PSD4Q8NDX1 1056 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 OR7G1Q8NGA0 311 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 C16orf78Q8WTQ4 265 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 EBPLQ9BY08 206 aa14.56□□□□□ -0.08
CCDC78-216ENST00000544996 WWTR1Q9GZV5 400 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms