RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NSMCE2Q96MF7 247 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 STX18Q9P2W9 335 aaKnown RBP28.61■■■□□ 2.17
CCM2-219ENST00000544363 MAU2Q9Y6X3 613 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 ASCC3Q8N3C0 2202 aaKnown RBP28.6■■■□□ 2.17
CCM2-219ENST00000544363 CXCR6O00574 342 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 LRP3O75074 770 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 CBFA2T3O75081 653 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 SLC34A2O95436 690 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 PPP2R1BP30154 601 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 PTGER1P34995 402 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 CASP9P55211 416 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 POLE2P56282 527 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 ID2Q02363 134 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 VMACQ2NL98 169 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 ZNF595Q8IYB9 648 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 GOLM1Q8NBJ4 401 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 RBCK1Q9BYM8 510 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 NCDNQ9UBB6 729 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 RAPGEFL1Q9UHV5 662 aa28.6■■■□□ 2.17
CCM2-219ENST00000544363 SCN2AQ99250 2005 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 TNFRSF21O75509 655 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 ETFAP13804 333 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 MAP7Q14244 749 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 B3GNT8Q7Z7M8 397 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 COL26A1Q96A83 441 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 MOAP1Q96BY2 351 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 TBC1D20Q96BZ9 403 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 DUS3LQ96G46 650 aaKnown RBP28.59■■■□□ 2.17
CCM2-219ENST00000544363 ZCCHC3Q9NUD5 404 aaKnown RBP28.59■■■□□ 2.17
CCM2-219ENST00000544363 RARRES3Q9UL19 164 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 SRPK3Q9UPE1 567 aa28.59■■■□□ 2.17
CCM2-219ENST00000544363 H3BNX3 289 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 NUDT7P0C024 238 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 CSTF2P33240 577 aaKnown RBP eCLIP28.58■■■□□ 2.173e-8■■■■■ 39.8
CCM2-219ENST00000544363 OR1D4P47884 311 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 TMEM107Q6UX40 140 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 ELP4Q96EB1 424 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 PARD6AQ9NPB6 346 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 A0A1B0GX78 115 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 TCRBV5S2A0A599 114 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 AGRPO00253 132 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 XCR1P46094 333 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 TP53BP2Q13625 1128 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 LTB4RQ15722 352 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 MTX3Q5HYI7 312 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 BHLHB9Q6PI77 547 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 C3orf14Q9HBI5 128 aa28.58■■■□□ 2.17
CCM2-219ENST00000544363 FAF1Q9UNN5 650 aaPredicted RBP28.58■■■□□ 2.17
CCM2-219ENST00000544363 C4orf47A7E2U8 309 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 CLDN4O14493 209 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 EMC8O43402 210 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 CTNSO60931 367 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 CREG1O75629 220 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 ATP1B1P05026 303 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 BMP2P12643 396 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 ANPEPP15144 967 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 MC3RP41968 323 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 DSG2Q14126 1118 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 ERV3-1Q14264 604 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 C16orf72Q14CZ0 275 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 GCNT6Q5T4J0 391 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 ADCY4Q8NFM4 1077 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 OR56A1Q8NGH5 318 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 OR52E4Q8NGH9 312 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 ZDHHC19Q8WVZ1 309 aaPredicted RBP28.57■■■□□ 2.16
CCM2-219ENST00000544363 NCLNQ969V3 563 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 MAGED4Q96JG8 741 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 ZNF304Q9HCX3 659 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 PRTFDC1Q9NRG1 225 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 OCIAD1Q9NX40 245 aa28.57■■■□□ 2.16
CCM2-219ENST00000544363 HYAL3O43820 417 aaPredicted RBP28.56■■■□□ 2.16
CCM2-219ENST00000544363 FHP07954 510 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 PRR5P85299 388 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 VEZF1Q14119 521 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 RHBDD2Q6NTF9 364 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 SZRD1Q7Z422 152 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 KAT2AQ92830 837 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 FAM162AQ96A26 154 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 CDC6Q99741 560 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 IRF2BPLQ9H1B7 796 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 TMEM38AQ9H6F2 299 aa28.56■■■□□ 2.16
CCM2-219ENST00000544363 PLOD2O00469 737 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 SLC7A1P30825 629 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 PRIM2P49643 509 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 PDX1P52945 283 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 RBBP4Q09028 425 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 SLC13A2Q13183 592 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 BPHLQ86WA6 291 aaPredicted RBP28.55■■■□□ 2.16
CCM2-219ENST00000544363 C11orf65Q8NCR3 313 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 AGBL5Q8NDL9 886 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 NETO1Q8TDF5 533 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 CANT1Q8WVQ1 401 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 SLC35G5Q96KT7 338 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 SLC7A5P2Q9GIP4 190 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 ANGPTL2Q9UKU9 493 aa28.55■■■□□ 2.16
CCM2-219ENST00000544363 MYOCOSA0A1B0GUC4 107 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 DHRS12A0PJE2 317 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 CDC123O75794 336 aaPredicted RBP28.54■■■□□ 2.16
CCM2-219ENST00000544363 BAG2O95816 211 aa28.54■■■□□ 2.16
CCM2-219ENST00000544363 SLC35E2P0CK97 266 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms