RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 RIMS3Q9UJD0 308 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 TP53TG5Q9Y2B4 290 aa8.5□□□□□ -1.05
VPS13D-212ENST00000543766 A0A1W2PNV4 684 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 A0A1W2PPM1 405 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SGPL1O95470 568 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SEC24AO95486 1093 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 IGF2P01344 180 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ENO1P06733 434 aaKnown RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 HOXA9P31269 272 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 PTGFRP43088 359 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 IRF8Q02556 426 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CCDC85BQ15834 202 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 FAM74A1Q5RGS3 127 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 VITQ6UXI7 678 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SERPINA13PQ6UXR4 307 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 NAA40Q86UY6 237 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CPT1CQ8TCG5 803 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CERS2Q96G23 380 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF2Q9BSG1 426 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 KRCC1Q9NPI7 259 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 MCUBQ9NWR8 336 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ELOVL2Q9NXB9 296 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 DPP3Q9NY33 737 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 KCNK4Q9NYG8 393 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 TCFL5Q9UL49 500 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 COLQQ9Y215 455 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SLC5A6Q9Y289 635 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ROBO3Q96MS0 1386 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 KDM3AQ9Y4C1 1321 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SNAP91O60641 907 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 FAM155BO75949 473 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 C22orf31O95567 290 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 PLS3P13797 630 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CCNOP22674 350 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CA4P22748 312 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 TECP42680 631 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CLDN8P56748 225 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 LSM3P62310 102 aaKnown RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 FSTL1Q12841 308 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CNTN1Q12860 1018 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 NFATC3Q12968 1075 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 NDUFAF6Q330K2 333 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ANGEL2Q5VTE6 544 aaKnown RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 MFSD14CQ5VZR4 134 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 WSCD1Q658N2 575 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SLC27A4Q6P1M0 643 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 PADI6Q6TGC4 694 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ABHD11Q8NFV4 315 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 IL31RAQ8NI17 732 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 GRHL3Q8TE85 626 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 STYXQ8WUJ0 223 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 EAF1Q96JC9 268 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ZSCAN10Q96SZ4 725 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 DPCDQ9BVM2 203 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 FGFBP2Q9BYJ0 223 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 MANSC1Q9H8J5 431 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 EFCAB1Q9HAE3 211 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 MED11Q9P086 117 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ARMCX1Q9P291 453 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 FER1L6Q2WGJ9 1857 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 A0A1W2PQ45 241 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 A0A1W2PQY0 241 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SLC5A10A0PJK1 596 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 NEMP2A6NFY4 417 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 FAM74A7A6NL05 159 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CLCA1A8K7I4 914 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF705EA8MWA4 302 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 PHYHO14832 338 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 RHBDL1O75783 438 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 WDR47O94967 919 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 LINC00614P0C842 121 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CEBPBP17676 345 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 PROZP22891 400 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 CCR8P51685 355 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 PPIGQ13427 754 aaKnown RBP eCLIP8.49□□□□□ -1.05
VPS13D-212ENST00000543766 TUBB3Q13509 450 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 RAB31Q13636 194 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 FAM74A3Q4VXF1 159 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 DCST1Q5T197 706 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ACTL9Q8TC94 416 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 PAQR8Q8TEZ7 354 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 FAR1Q8WVX9 515 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 MYLPFQ96A32 169 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 OTULINQ96BN8 352 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 BCO2Q9BYV7 579 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 TOLLIPQ9H0E2 274 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 ANKRA2Q9H9E1 313 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 PAK5Q9P286 719 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 SLC23A1Q9UHI7 598 aa8.49□□□□□ -1.05
VPS13D-212ENST00000543766 OR6C76A6NM76 312 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 H3BNC9 293 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 NTSR2O95665 410 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 SNRPCP09234 159 aaKnown RBP8.48□□□□□ -1.05
VPS13D-212ENST00000543766 ADH6P28332 368 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 LTBRP36941 435 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CDH11P55287 796 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 MBOAT1Q6ZNC8 495 aa8.48□□□□□ -1.05
VPS13D-212ENST00000543766 CHST15Q7LFX5 561 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms