RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 KRT6BP04259 564 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 KLK1P06870 262 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 HOXD4P09016 255 aaPredicted RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 PORP16435 677 aaPredicted RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 NT5EP21589 574 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 GRNP28799 593 aaKnown RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 HMOX2P30519 316 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 SSTR2P30874 369 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 KRT6CP48668 564 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 DNASE1L1P49184 302 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 TMED10P49755 219 aaKnown RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 XKP51811 444 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 NR0B1P51843 470 aaKnown RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 MAPK12P53778 367 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 HERVK_113P63132 956 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 ERVK-8P63133 956 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 PMPCAQ10713 525 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 SF3B4Q15427 424 aaKnown RBP eCLIP6.62□□□□□ -1.35
NUP43-206ENST00000543637 SPRED3Q2MJR0 410 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 CMPK2Q5EBM0 449 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 TBCELQ5QJ74 424 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 FRG2Q64ET8 278 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 OR52E8Q6IFG1 317 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 MRM1Q6IN84 353 aaKnown RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 ZNF585AQ6P3V2 769 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 TRMT10CQ7L0Y3 403 aaKnown RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 LCA5Q86VQ0 697 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 LURAP1LQ8IV03 231 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 SLC22A9Q8IVM8 553 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 PLD6Q8N2A8 252 aaKnown RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 LIX1Q8N485 282 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 FAM109AQ8N4B1 249 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 ZNF321PQ8N8H1 164 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 OR4F6Q8NGB9 312 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 OR5M3Q8NGP4 307 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 WDR20Q8TBZ3 569 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 CHTF18Q8WVB6 975 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 TP53INP1Q96A56 240 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 JSRP1Q96MG2 331 aaPredicted RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 GPR78Q96P69 363 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 CDK15Q96Q40 435 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 FRG2BQ96QU4 278 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 DMRTA2Q96SC8 542 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 FAIM2Q9BWQ8 316 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 ERVK-6Q9BXR3 956 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 FUT8Q9BYC5 575 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 SLC24A3Q9HC58 644 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 PFDN4Q9NQP4 134 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 DEPPQ9NTK1 212 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 XPR1Q9UBH6 696 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 B4GALT7Q9UBV7 327 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 DCDC2Q9UHG0 476 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 ADAM29Q9UKF5 820 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 SLC12A4Q9UP95 1085 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 ERVK-19Q9WJR5 959 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 STK38LQ9Y2H1 464 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 ZNF780BQ9Y6R6 833 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 DIDO1Q9BTC0 2240 aaKnown RBP6.62□□□□□ -1.35
NUP43-206ENST00000543637 NINQ8N4C6 2090 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 HCFC1P51610 2035 aa6.62□□□□□ -1.35
NUP43-206ENST00000543637 A0A0A6YYD5 115 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 TRGV5A0A0B4J1U4 118 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 G3V3Y1 287 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 SNPHO15079 494 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 PGRMC2O15173 223 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 HCN1O60741 890 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 WDR1O75083 606 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 CDH16O75309 829 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 EEDO75530 441 aaKnown RBP6.61□□□□□ -1.35
NUP43-206ENST00000543637 ERAL1O75616 437 aaKnown RBP6.61□□□□□ -1.35
NUP43-206ENST00000543637 OR4F21O95013 312 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 PDYNP01213 254 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 IGKV3-11P04433 115 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 CCL3P10147 92 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 GABRA1P14867 456 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 CSNK2A2P19784 350 aaPredicted RBP6.61□□□□□ -1.35
NUP43-206ENST00000543637 CAPN3P20807 821 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 IMPDH1P20839 514 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 TNFRSF8P28908 595 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 CHRNB4P30926 498 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 PIGAP37287 484 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 MAGEA5P43359 124 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 ZFP36L2P47974 494 aaKnown RBP6.61□□□□□ -1.35
NUP43-206ENST00000543637 MASP1P48740 699 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 SLC37A1P57057 533 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 TRA2BP62995 288 aaKnown RBP6.61□□□□□ -1.35
NUP43-206ENST00000543637 CLCQ05315 142 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 RASA2Q15283 850 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 TOMM20Q15388 145 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 ZNF791Q3KP31 576 aaPredicted RBP6.61□□□□□ -1.35
NUP43-206ENST00000543637 GGTA1PQ4G0N0 100 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 ADGRD1Q6QNK2 874 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 TIFABQ6ZNK6 161 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 PACS2Q86VP3 889 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 GALNT12Q8IXK2 581 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 C9orf40Q8IXQ3 194 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 CLYBLQ8N0X4 340 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 METTL4Q8N3J2 472 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 TMEM251Q8N6I4 163 aa6.61□□□□□ -1.35
NUP43-206ENST00000543637 OR7G1Q8NGA0 311 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms