RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 DNASE1P24855 282 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 TPMTP51580 245 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 CTBP2P56545 445 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 PCBP3P57721 371 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 DCDC1P59894 354 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 CSTF1Q05048 431 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 EEF1A2Q05639 463 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 PUDPQ08623 228 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 CHIT1Q13231 466 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 BTN1A1Q13410 526 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 NFATC2Q13469 925 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 ZNF273Q14593 569 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 LGALSLQ3ZCW2 172 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 SDHAF4Q5VUM1 108 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 USP45Q70EL2 814 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 UBE2R2Q712K3 238 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 DENND1CQ8IV53 801 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 OR6C4Q8NGE1 309 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 SLC9A6Q92581 669 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 FBXW5Q969U6 566 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 UBL7Q96S82 380 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 SLC35A5Q9BS91 424 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 POLR2J3Q9H1A7 115 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 DPAGT1Q9H3H5 408 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 ELP3Q9H9T3 547 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 FGF20Q9NP95 211 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 SPATA6Q9NWH7 488 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 KLHL42Q9P2K6 505 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 EXTL2Q9UBQ6 330 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 CRLS1Q9UJA2 301 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 EXOSC1Q9Y3B2 195 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 CACNG2Q9Y698 323 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 NINQ8N4C6 2090 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 LTBP3Q9NS15 1303 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 MEIKINA0A087WXM9 373 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 MGAT4DA6NG13 374 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 M0R233 179 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 HRO43593 1189 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 UGDHO60701 494 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 WDPCPO95876 746 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 C8GP07360 202 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 SRPRAP08240 638 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 HIST1H2AGP0C0S8 130 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 ARAFP10398 606 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 HSD3B1P14060 373 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 HIST1H2ADP20671 130 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 IDSP22304 550 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 KELP23276 732 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 HSD3B2P26439 372 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 CDH4P55283 916 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 DSTNP60981 165 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 TWF1Q12792 350 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 RAB40BQ12829 278 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 COX10Q12887 443 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 PUS10Q3MIT2 529 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 SYT14P1Q58G82 188 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 SHEQ5VZ18 495 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 LIPJQ5W064 366 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 SPRYD7Q5W111 196 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 ZNF772Q68DY9 489 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 NCEH1Q6PIU2 408 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 CD300LGQ6UXG3 332 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 LIPIQ6XZB0 460 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 WDR53Q7Z5U6 358 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 BCDIN3DQ7Z5W3 292 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 LINC00518Q8N0U6 118 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 RNF175Q8N4F7 328 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 ANKRD53Q8N9V6 530 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 OR52H1Q8NGJ2 320 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 LILRB1Q8NHL6 650 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 PCNPQ8WW12 178 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 SENP5Q96HI0 755 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 HIST1H2AHQ96KK5 128 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 SUSD3Q96L08 255 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 B3GALT6Q96L58 329 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 ZNF582Q96NG8 517 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 TEFMQ96QE5 360 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 HIST1H2AJQ99878 128 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 H2AFJQ9BTM1 129 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 NLNQ9BYT8 704 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 BHLHE41Q9C0J9 482 aaPredicted RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 ABCG5Q9H222 651 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 RC3H2Q9HBD1 1191 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 SEMA3GQ9NS98 782 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 NUDT15Q9NV35 164 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 GPATCH2Q9NW75 528 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 IL20Q9NYY1 176 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 TVP23BQ9NYZ1 205 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 AFF4Q9UHB7 1163 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 SCP2D1Q9UJQ7 156 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 ACSL5Q9ULC5 683 aa9.24□□□□□ -0.93
TCF4-208ENST00000543082 EXO1Q9UQ84 846 aaKnown RBP9.24□□□□□ -0.93
TCF4-208ENST00000543082 HELZP42694 1942 aaKnown RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 KRBOX1C9JBD0 128 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 CBX4O00257 560 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 KPNA5O15131 536 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 CASC3O15234 703 aaKnown RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 OR10H3O60404 316 aa9.23□□□□□ -0.93
TCF4-208ENST00000543082 IGFBP1P08833 259 aaPredicted RBP9.23□□□□□ -0.93
TCF4-208ENST00000543082 ANXA4P09525 319 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms