RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 GLRA3O75311 464 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ULK1O75385 1050 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PRKRAO75569 313 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OR2J2O76002 312 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 UNC5CO95185 931 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 AIFM1O95831 613 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 LDLRP01130 860 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 STSP08842 583 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SLC35E2P0CK97 266 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NR2F6P10588 404 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 MYL2P10916 166 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 HSD3B1P14060 373 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 HSD3B2P26439 372 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PIK3R1P27986 724 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 HK2P52789 917 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PKNOX1P55347 436 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PER3P56645 1201 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 KCNK10P57789 538 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 NAA20P61599 178 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PLIN5Q00G26 463 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 RBPJQ06330 500 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CCDC153Q494R4 210 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 PIGGQ5H8A4 983 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 IL20RBQ6UXL0 311 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 LRIG3Q6UXM1 1119 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ZYG11AQ6WRX3 759 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 C16orf47Q6ZP98 133 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 DGAT2L6Q6ZPD8 337 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SULF2Q8IWU5 870 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CYP4Z2PQ8N1L4 340 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CCNYL1Q8N7R7 359 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CDYL2Q8N8U2 506 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 POGLUT1Q8NBL1 392 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 OR4K14Q8NGD5 310 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ASB15Q8WXK1 588 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 RIT1Q92963 219 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 UCN3Q969E3 161 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ART5Q96L15 291 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TMEM237Q96Q45 408 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 RASL10BQ96S79 203 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 MRPL1Q9BYD6 325 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 TIMMDC1Q9NPL8 285 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 VPS29Q9UBQ0 182 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 EMCNQ9ULC0 261 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 ERVK-11Q9UQG0 969 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 KLF13Q9Y2Y9 288 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 EXPH5Q8NEV8 1989 aa9.03□□□□□ -0.96
TNFRSF1A-214ENST00000543048 CRYBG3Q68DQ2 2970 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 NUP214P35658 2090 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 TLDC2A0PJX2 215 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 SMIM23A6NLE4 172 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 A8MVJ9 347 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 NPIPA5E9PKD4 350 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 COPEO14579 308 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 ASNA1O43681 348 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 PEX1O43933 1283 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 WISP2O76076 250 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 ESRRBO95718 433 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 PROCP04070 461 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 IGKV3-11P04433 115 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 ENO1P06733 434 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 HMOX2P30519 316 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 XKP51811 444 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 MAPK12P53778 367 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 DNAJB13P59910 316 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 TRA2BP62995 288 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 SLC18A2Q05940 514 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 IFFO1Q0D2I5 559 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 TBL3Q12788 808 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 CSTF3Q12996 717 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 LCP2Q13094 533 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 ZNF267Q14586 743 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 MPEG1Q2M385 716 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 SPRED3Q2MJR0 410 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 NDUFAF5Q5TEU4 345 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 OR52E8Q6IFG1 317 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 OPN5Q6U736 354 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 COMMD6Q7Z4G1 85 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 MDGA2Q7Z553 956 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 CPSF7Q8N684 471 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 SLC15A4Q8N697 577 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 GBP7Q8N8V2 638 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 NUBPLQ8TB37 319 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 EPS8L3Q8TE67 593 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 CHTF18Q8WVB6 975 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 SREK1Q8WXA9 508 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 RELTQ969Z4 430 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 TM4SF18Q96CE8 201 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 FBXL20Q96IG2 436 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 PKNOX2Q96KN3 472 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 SGCZQ96LD1 299 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 GPR137Q96N19 417 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 FRMD6Q96NE9 622 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 ZIM3Q96PE6 472 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 HPF1Q9NWY4 346 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 PSME2Q9UL46 239 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 NPIPA1Q9UND3 350 aa9.02□□□□□ -0.97
TNFRSF1A-214ENST00000543048 PCDHA9Q9Y5H5 950 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms