RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 SFXN3Q9BWM7 321 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 PACSIN1Q9BY11 444 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 UGT2B28Q9BY64 529 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 PRDM14Q9GZV8 571 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 ESRP2Q9H6T0 727 aaKnown RBP4.34□□□□□ -1.71
LIMS1-214ENST00000542845 ARNT2Q9HBZ2 717 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 PRTFDC1Q9NRG1 225 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 FAM114A2Q9NRY5 505 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 CATSPERZQ9NTU4 200 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 GALPQ9UBC7 116 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 PACSIN3Q9UKS6 424 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 INTUQ9ULD6 942 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 MED12LQ86YW9 2145 aa4.34□□□□□ -1.71
LIMS1-214ENST00000542845 MEGF8Q7Z7M0 2845 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 UQCRHLA0A096LP55 91 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 IGKV3D-11A0A0A0MRZ8 115 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 A0A1W2PP18 115 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 MROH6A6NGR9 719 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 LRRC3CA6NJW4 275 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 PRMT5O14744 637 aaPredicted RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 GNB5O14775 395 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 SHOXO15266 292 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 CD3EAPO15446 510 aaKnown RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 TPD52L2O43399 206 aaKnown RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 SPOPO43791 374 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 NIPSNAP2O75323 286 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ALX3O95076 343 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 SCGB1D2O95969 90 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 GAS8O95995 478 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 IGHV4-39P01824 125 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 C1QAP02745 245 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ERGP11308 486 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 CDH1P12830 882 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 IGFBP5P24593 272 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 HRH2P25021 359 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 UGT2B10P36537 528 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 HSD17B2P37059 387 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 CDKN2BP42772 138 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 RPL21P46778 160 aaKnown RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 NUDT6P53370 316 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 BTN3A2P78410 334 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 CCZ1BP86790 482 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 CCZ1P86791 482 aaPredicted RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 POU4F1Q01851 419 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 RGS1Q08116 209 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 STX4Q12846 297 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 CDK5R2Q13319 367 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 GAB1Q13480 694 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ARHGAP19Q14CB8 494 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 KBTBD12Q3ZCT8 623 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ACSBG2Q5FVE4 666 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 BEX5Q5H9J7 111 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 TSTD2Q5T7W7 516 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 PPP4R4Q6NUP7 873 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 VWA1Q6PCB0 445 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 SH2D5Q6ZV89 423 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ZNF534Q76KX8 674 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 C17orf64Q86WR6 236 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 CA13Q8N1Q1 262 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ZNF610Q8N9Z0 462 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 FAM47BQ8NA70 645 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 MFSD9Q8NBP5 474 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 OR10G3Q8NGC4 313 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 OR52K1Q8NGK4 314 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 OR13J1Q8NGT2 312 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 SLC35G2Q8TBE7 412 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 RDH11Q8TC12 318 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 DOK4Q8TEW6 326 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 FBLIM1Q8WUP2 373 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 IGFBPL1Q8WX77 278 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ATL1Q8WXF7 558 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 DIO2Q92813 273 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 GCDHQ92947 438 aaPredicted RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 C3orf49Q96BT1 292 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 PYCR2Q96C36 320 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 FAR2Q96K12 515 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ZNF597Q96LX8 424 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 ZNF778Q96MU6 729 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 GNRHR2Q96P88 292 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 SLC39A3Q9BRY0 314 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 KCNF1Q9H3M0 494 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 KLHL31Q9H511 634 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 IFT22Q9H7X7 185 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 MANSC1Q9H8J5 431 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 L2HGDHQ9H9P8 463 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 CCDC177Q9NQR7 707 aaPredicted RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 TMEM160Q9NX00 188 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 QPCTLQ9NXS2 382 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 MARCH4Q9P2E8 410 aaPredicted RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 UVRAGQ9P2Y5 699 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 FEZ2Q9UHY8 353 aaPredicted RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 KCNS2Q9ULS6 477 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 SH2B3Q9UQQ2 575 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 PCDHA9Q9Y5H5 950 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 MAGED1Q9Y5V3 778 aaPredicted RBP4.33□□□□□ -1.72
LIMS1-214ENST00000542845 SVEP1Q4LDE5 3571 aa4.33□□□□□ -1.72
LIMS1-214ENST00000542845 hCG_1818297A0A087WSY0 165 aa4.32□□□□□ -1.72
LIMS1-214ENST00000542845 A0A1W2PNV4 684 aa4.32□□□□□ -1.72
LIMS1-214ENST00000542845 C17orf105B2RV13 164 aa4.32□□□□□ -1.72
LIMS1-214ENST00000542845 E5RI56 91 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms