RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ADAP2Q9NPF8 381 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 PNO1Q9NRX1 252 aaKnown RBP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 PCDHGB4Q9UN71 923 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 MRPS18BQ9Y676 258 aaKnown RBP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 LOC102723996A0A087X1L8 192 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 MYOCOSA0A1B0GUC4 107 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 RNASET2O00584 256 aaKnown RBP21.62■■□□□ 1.05
HOMER3-205ENST00000542541 SNRPB2P08579 225 aaKnown RBP21.62■■□□□ 1.05
HOMER3-205ENST00000542541 OTX2P32243 289 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 MLC1Q15049 377 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 MPEG1Q2M385 716 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 C6orf163Q5TEZ5 329 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 CPZQ66K79 652 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 LANCL3Q6ZV70 420 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 AMDHD1Q96NU7 426 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 CCNL2Q96S94 520 aaPredicted RBP21.62■■□□□ 1.05
HOMER3-205ENST00000542541 CCDC106Q9BWC9 280 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 HS3ST3B1Q9Y662 390 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 CLCA3PQ9Y6N3 262 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 SLITRK5O94991 958 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 TIGD2Q4W5G0 525 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 SFT2D3Q587I9 215 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 OR5P2Q8WZ92 322 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 DAZLQ92904 295 aaKnown RBP21.62■■□□□ 1.05
HOMER3-205ENST00000542541 RIT1Q92963 219 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 PPWD1Q96BP3 646 aaKnown RBP21.62■■□□□ 1.05
HOMER3-205ENST00000542541 LPAR4Q99677 370 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 SLC25A23Q9BV35 468 aa21.62■■□□□ 1.05
HOMER3-205ENST00000542541 A0A1W2PP18 115 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 A0A1W2PS29 197 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 CAPNS1P04632 268 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 NT5EP21589 574 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 EIF2S3P41091 472 aaKnown RBP21.61■■□□□ 1.05
HOMER3-205ENST00000542541 WNT3P56703 355 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 PHC1P78364 1004 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 TERF2Q15554 542 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 MAPKAPK3Q16644 382 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 VPS26BQ4G0F5 336 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 NUP210LQ5VU65 1888 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 UNQ6494/PRO21346Q6UXR6 183 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 GK5Q6ZS86 529 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 SUN3Q8TAQ9 357 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 VPS33AQ96AX1 596 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 ERP27Q96DN0 273 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 GLIPR2Q9H4G4 154 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 BTNL2Q9UIR0 455 aa21.61■■□□□ 1.05
HOMER3-205ENST00000542541 PEX12O00623 359 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 SCN2BO60939 215 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 CRTC2Q53ET0 693 aaPredicted RBP21.6■■□□□ 1.05
HOMER3-205ENST00000542541 KIRREL2Q6UWL6 708 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 PPP1R32Q7Z5V6 425 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 GALNT12Q8IXK2 581 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 OR14A16Q8NHC5 309 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 RP9Q8TA86 221 aaKnown RBP21.6■■□□□ 1.05
HOMER3-205ENST00000542541 CXorf21Q9HAI6 301 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 NEUROD4Q9HD90 331 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 SLAMF7Q9NQ25 335 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 NDUFAF1Q9Y375 327 aa21.6■■□□□ 1.05
HOMER3-205ENST00000542541 SCN2AQ99250 2005 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 A0A1W2PQ72 361 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 A8MUA0 341 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 C17orf105B2RV13 164 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 ANGPT2O15123 496 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 GPC1P35052 558 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 DUSP2Q05923 314 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 STX5Q13190 355 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 IL10RAQ13651 578 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 CYLC2Q14093 348 aaPredicted RBP21.59■■□□□ 1.05
HOMER3-205ENST00000542541 FAM91A1Q658Y4 838 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 ZNF551Q7Z340 670 aaPredicted RBP21.59■■□□□ 1.05
HOMER3-205ENST00000542541 ZSCAN1Q8NBB4 408 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 ZNF675Q8TD23 568 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 C8orf44Q96CB5 159 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 CMTM5Q96DZ9 223 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 ITCHQ96J02 903 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 ART5Q96L15 291 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 CCDC115Q96NT0 180 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 ZNF700Q9H0M5 742 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 SLC52A3Q9NQ40 469 aa21.59■■□□□ 1.05
HOMER3-205ENST00000542541 LOC100653049A0A140TA62 436 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 ZNF891A8MT65 544 aaPredicted RBP21.58■■□□□ 1.05
HOMER3-205ENST00000542541 SOCS6O14544 535 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 KRT34O76011 436 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 C6orf47O95873 294 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 CAPN3P20807 821 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 EFNA1P20827 205 aaPredicted RBP21.58■■□□□ 1.05
HOMER3-205ENST00000542541 MAP4K2Q12851 820 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 HSPB3Q12988 150 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 SPRED3Q2MJR0 410 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 PAPD4Q6PIY7 484 aaKnown RBP21.58■■□□□ 1.05
HOMER3-205ENST00000542541 NDUFAF7Q7L592 441 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 MRGPREQ86SM8 312 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 ANKRD46Q86W74 232 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 FITM2Q8N6M3 262 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 OR11G2Q8NGC1 345 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 OR9A2Q8NGT5 310 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 ADAMTS17Q8TE56 1095 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 PTPMT1Q8WUK0 201 aaPredicted RBP21.58■■□□□ 1.05
HOMER3-205ENST00000542541 TUBB6Q9BUF5 446 aa21.58■■□□□ 1.05
HOMER3-205ENST00000542541 TAS2R9Q9NYW1 312 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms