RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 SPTAN1Q13813 2472 aaKnown RBP7.76□□□□□ -1.17
MRPS35-204ENST00000542199 SHROOM3Q8TF72 1996 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 IGHV5-10-1A0A0J9YXX1 117 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 C1orf232A0A0U1RR37 186 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 LRRD1A4D1F6 860 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 RGSL1A5PLK6 1076 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ANKRD66B4E2M5 251 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 INAFM1C9JVW0 142 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 TIMM23O14925 209 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ZW10O43264 779 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ITIH1P19827 911 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ALDH4A1P30038 563 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ETV5P41161 510 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ACTR1BP42025 376 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 CD86P42081 329 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 FASLGP48023 281 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 SPINT3P49223 89 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 F2RL1P55085 397 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ACTR1AP61163 376 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ARF3P61204 181 aaPredicted RBP7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ARF1P84077 181 aaKnown RBP7.75□□□□□ -1.17
MRPS35-204ENST00000542199 GPS2Q13227 327 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 MESDQ14696 234 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 C16orf72Q14CZ0 275 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 AMZ1Q400G9 498 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 MMEL1Q495T6 779 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ITPRIPL1Q6GPH6 555 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 GALNT13Q8IUC8 556 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 SFRP1Q8N474 314 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 NEXN-AS1Q8NBZ9 246 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 CCNYQ8ND76 341 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 OR4D9Q8NGE8 314 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 TADA1Q96BN2 335 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 CCDC42Q96M95 316 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 TRIB3Q96RU7 358 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 CHP1Q99653 195 aa7.75□□□□□ -1.17
MRPS35-204ENST00000542199 RBM38Q9H0Z9 239 aaKnown RBP7.75□□□□□ -1.17
MRPS35-204ENST00000542199 NHEJ1Q9H9Q4 299 aaPredicted RBP7.75□□□□□ -1.17
MRPS35-204ENST00000542199 ZNHIT6Q9NWK9 470 aaKnown RBP7.75□□□□□ -1.17
MRPS35-204ENST00000542199 PCYT1BQ9Y5K3 369 aaPredicted RBP7.75□□□□□ -1.17
MRPS35-204ENST00000542199 IGHV1OR21-1A0A087WYE8 117 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 A6NCN8 305 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 LIPT2A6NK58 231 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 INPP4BO15327 924 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 EML2O95834 649 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 EIF2S1P05198 315 aaKnown RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 HOXB5P09067 269 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 THRAP10827 490 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 LIPCP11150 499 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 CCL4P13236 92 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 CD82P27701 267 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 SLC1A1P43005 524 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 RFX2P48378 723 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 LIMK2P53671 638 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 CLNS1AP54105 237 aaKnown RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 DRG2P55039 364 aaKnown RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 TRA2AQ13595 282 aaKnown RBP eCLIP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 PDK1Q15118 436 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 TGIF1Q15583 401 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 TAZQ16635 292 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 C2orf68Q2NKX9 166 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 TAF1BQ53T94 588 aaPredicted RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 FNBP1LQ5T0N5 605 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 FAM205BPQ63HN1 556 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 MARK2Q7KZI7 788 aaKnown RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 HAPLN4Q86UW8 402 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 SLC37A2Q8TED4 501 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 IMP4Q96G21 291 aaKnown RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 MLPHQ9BV36 600 aaPredicted RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 C1QTNF5Q9BXJ0 243 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 SLC25A51Q9H1U9 297 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 EIF2B3Q9NR50 452 aaKnown RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 NFKBIL1Q9UBC1 381 aaPredicted RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 HEY1Q9Y5J3 304 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 PTGDR2Q9Y5Y4 395 aa7.74□□□□□ -1.17
MRPS35-204ENST00000542199 USP9YO00507 2555 aaPredicted RBP7.74□□□□□ -1.17
MRPS35-204ENST00000542199 CENPEQ02224 2701 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 NBPF19A0A087WUL8 3843 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 SPRY3O43610 288 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 ITM2AO43736 263 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 TIPRLO75663 272 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 SOX30O94993 753 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 NKX2-2O95096 273 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 ATP1A1P05023 1023 aaKnown RBP7.73□□□□□ -1.17
MRPS35-204ENST00000542199 TPM1P09493 284 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 HADHAP40939 763 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 COMPP49747 757 aaPredicted RBP7.73□□□□□ -1.17
MRPS35-204ENST00000542199 DCDC1P59894 354 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 ADORA2A-AS1P86434 159 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 SORDQ00796 357 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 AP1B1Q10567 949 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 CSTF3Q12996 717 aaKnown RBP7.73□□□□□ -1.17
MRPS35-204ENST00000542199 SRSF6Q13247 344 aaKnown RBP7.73□□□□□ -1.17
MRPS35-204ENST00000542199 FAM182AQ5T1J6 154 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 NKAIN2Q5VXU1 208 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 PDPK2PQ6A1A2 396 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 IYDQ6PHW0 289 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 KLHL24Q6TFL4 600 aa7.73□□□□□ -1.17
MRPS35-204ENST00000542199 MFSD7Q6UXD7 560 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms