RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 HPNP05981 417 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 CTSSP25774 331 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 OPRM1P35372 400 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 HSPA7P48741 367 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 IRF8Q02556 426 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 HP1BP3Q5SSJ5 553 aaPredicted RBP24.57■■□□□ 1.52
CHFR-218ENST00000540963 VASNQ6EMK4 673 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 LAS2Q8IYD9 372 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 SMR3AQ99954 134 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 MCMBPQ9BTE3 642 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 WWTR1Q9GZV5 400 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 MOCS1Q9NZB8 636 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 MBD3L4A6NDZ8 208 aaPredicted RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 MBD3L3A6NE82 208 aaPredicted RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 MBD3L5A6NJ08 208 aaPredicted RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 RTCAO00442 366 aaKnown RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 TP53I11O14683 189 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 WISP3O95389 354 aaPredicted RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 ALOX15P16050 662 aaPredicted RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 TLX1P31314 330 aaPredicted RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 SSR2P43308 183 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 SLC12A2P55011 1212 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 POU4F1Q01851 419 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 CHIT1Q13231 466 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 CLEC9AQ6UXN8 241 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 RNF111Q6ZNA4 994 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 SYDE1Q6ZW31 735 aaPredicted RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 OR4N5Q8IXE1 308 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 TAGAPQ8N103 731 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 PDPRQ8NCN5 879 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 MBD3L2Q8NHZ7 208 aaPredicted RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 ARSGQ96EG1 525 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 CMTM7Q96FZ5 175 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 SECISBP2Q96T21 854 aaKnown RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 UBQLN3Q9H347 655 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 CALHM2Q9HA72 323 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 PHF11Q9UIL8 331 aa24.56■■□□□ 1.52
CHFR-218ENST00000540963 PTBP2Q9UKA9 531 aaKnown RBP24.56■■□□□ 1.52
CHFR-218ENST00000540963 HRKO00198 91 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 HEXAP06865 529 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 CD53P19397 219 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 GALNSP34059 522 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 CDK9P50750 372 aaKnown RBP24.55■■□□□ 1.52
CHFR-218ENST00000540963 ARFIP1P53367 373 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 SLC37A1P57057 533 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 PCDH1Q08174 1060 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 SLAMF1Q13291 335 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 EBPQ15125 230 aaKnown RBP24.55■■□□□ 1.52
CHFR-218ENST00000540963 KHDRBS2Q5VWX1 349 aaKnown RBP24.55■■□□□ 1.52
CHFR-218ENST00000540963 OR4C11Q6IEV9 310 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 DGAT2L6Q6ZPD8 337 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 KRTAP1-3Q8IUG1 177 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 DIO2Q92813 273 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 PPWD1Q96BP3 646 aaKnown RBP24.55■■□□□ 1.52
CHFR-218ENST00000540963 GAL3ST4Q96RP7 486 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 YIPF4Q9BSR8 244 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 ADGRE2Q9UHX3 823 aa24.55■■□□□ 1.52
CHFR-218ENST00000540963 FBN3Q75N90 2809 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 KDM4EB2RXH2 506 aaPredicted RBP24.54■■□□□ 1.52
CHFR-218ENST00000540963 EPORP19235 508 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 WNT3P56703 355 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 ATP6V0D1P61421 351 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 HERVK_113P63132 956 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 ERVK-8P63133 956 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 RPS6KA2Q15349 733 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 PCBP2Q15366 365 aaKnown RBP eCLIP24.54■■□□□ 1.52
CHFR-218ENST00000540963 DEPDC1Q5TB30 811 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 MED27Q6P2C8 311 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 TAOK1Q7L7X3 1001 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 LRRC70Q7Z2Q7 622 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 GPR180Q86V85 440 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 ZCCHC7Q8N3Z6 543 aaKnown RBP24.54■■□□□ 1.52
CHFR-218ENST00000540963 LINC01560Q8TB33 94 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 SMPDL3BQ92485 455 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 TP53INP1Q96A56 240 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 ESAMQ96AP7 390 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 NTNG2Q96CW9 530 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 DACH2Q96NX9 599 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 ERVK-6Q9BXR3 956 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 EPB41L4BQ9H329 900 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 ERVK-19Q9WJR5 959 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 KIAA1549Q9HCM3 1950 aa24.54■■□□□ 1.52
CHFR-218ENST00000540963 TRAPPC6AO75865 159 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 TGFB1P01137 390 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 HRGP04196 525 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 TCP1P17987 556 aaKnown RBP24.53■■□□□ 1.52
CHFR-218ENST00000540963 ARL4CP56559 192 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 NKX6-1P78426 367 aaPredicted RBP24.53■■□□□ 1.52
CHFR-218ENST00000540963 TNFRSF17Q02223 184 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 TSPAN17Q96FV3 270 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 CENPKQ9BS16 269 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 ANGPTL4Q9BY76 406 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 FETUBQ9UGM5 382 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 PYCARDQ9ULZ3 195 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 CAMK2AQ9UQM7 478 aa24.53■■□□□ 1.52
CHFR-218ENST00000540963 FN1P02751 2386 aaKnown RBP24.52■■□□□ 1.52
CHFR-218ENST00000540963 EEF1E1-BLOC1S5C9J1V9 151 aa24.52■■□□□ 1.52
CHFR-218ENST00000540963 ARHGEF9O43307 516 aa24.52■■□□□ 1.52
CHFR-218ENST00000540963 EEF1E1O43324 174 aaKnown RBP24.52■■□□□ 1.52
CHFR-218ENST00000540963 BUD31P41223 144 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms