RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ABHD13Q7L211 337 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 GPR180Q86V85 440 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 HPS6Q86YV9 775 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 SLC15A3Q8IY34 581 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 TMEM132CQ8N3T6 1108 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 ZCCHC7Q8N3Z6 543 aaKnown RBP9.97□□□□□ -0.81
ATL3-204ENST00000540699 ENDOVQ8N8Q3 282 aaKnown RBP9.97□□□□□ -0.81
ATL3-204ENST00000540699 OR9A4Q8NGU2 314 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 DNAJB8Q8NHS0 232 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 ZCCHC10Q8TBK6 192 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 TMEM125Q96AQ2 219 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 MTERF3Q96E29 417 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 ZNF764Q96H86 408 aaPredicted RBP9.97□□□□□ -0.81
ATL3-204ENST00000540699 KCNC2Q96PR1 638 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 OR52E6Q96RD3 313 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 CGREF1Q99674 301 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 SEMA4CQ9C0C4 833 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 TGIF2Q9GZN2 237 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 PAIP1Q9H074 479 aaKnown RBP9.97□□□□□ -0.81
ATL3-204ENST00000540699 ANKHQ9HCJ1 492 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 PRM3Q9NNZ6 103 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 FAM120CQ9NX05 1096 aaKnown RBP9.97□□□□□ -0.81
ATL3-204ENST00000540699 CMTM6Q9NX76 183 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 IFT80Q9P2H3 777 aaPredicted RBP9.97□□□□□ -0.81
ATL3-204ENST00000540699 NXT1Q9UKK6 140 aaKnown RBP9.97□□□□□ -0.81
ATL3-204ENST00000540699 PACSIN3Q9UKS6 424 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 TCFL5Q9UL49 500 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 PADI2Q9Y2J8 665 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 NAALAD2Q9Y3Q0 740 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 MAP4K5Q9Y4K4 846 aa9.97□□□□□ -0.81
ATL3-204ENST00000540699 PCSK5Q92824 1860 aa9.96□□□□□ -0.81
ATL3-204ENST00000540699 A0A096LPI6 279 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 C15orf38-AP3S2A0A0A6YYH1 394 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 A0A0G2JN53 185 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 PRORSD1PA6NEY8 169 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 ZNF891A8MT65 544 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 ERI3O43414 337 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 CREG1O75629 220 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 KCNH1O95259 989 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SERPIND1P05546 499 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 ZNF888P0CJ79 500 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 IL1RNP18510 177 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 DDCP20711 480 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 FBLP22087 321 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 HIST1H1TP22492 207 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 ATP5A1P25705 553 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 RPL3P39023 403 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 SSR2P43308 183 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 MAPK12P53778 367 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 PLA2G16P53816 162 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 ACTR3P61158 418 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SKP1P63208 163 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 MC1RQ01726 317 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 C2orf80Q0P641 193 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SLC9A5Q14940 896 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 KPNB1Q14974 876 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 PRSS53Q2L4Q9 553 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 MPEG1Q2M385 716 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 PGS1Q32NB8 556 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SPATS1Q496A3 300 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SAMD4BQ5PRF9 694 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 CPTPQ5TA50 214 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 ANKRD26P1Q6NSI1 321 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 TRIM40Q6P9F5 258 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 CCDC81Q6ZN84 652 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 R3HCC1LQ7Z5L2 792 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 ARPINQ7Z6K5 226 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 METTL27Q8N6F8 245 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 SRFBP1Q8NEF9 429 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 OR8J3Q8NGG0 315 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 OR2Y1Q8NGV0 311 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 CDC26Q8NHZ8 85 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 ADAMTS17Q8TE56 1095 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 MIEF2Q96C03 454 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 MMABQ96EY8 250 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 ITCHQ96J02 903 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SPSB2Q99619 263 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 TBCDQ9BTW9 1192 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 DUSP26Q9BV47 211 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 NPLQ9BXD5 320 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 BHLHE41Q9C0J9 482 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 RMND5AQ9H871 391 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 IL1RL2Q9HB29 575 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 MKKSQ9NPJ1 570 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 SLC6A13Q9NSD5 602 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SLC25A37Q9NYZ2 338 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 VAPAQ9P0L0 249 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SUCOQ9UBS9 1254 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 CTSFQ9UBX1 484 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 GPN3Q9UHW5 284 aaPredicted RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 BTNL2Q9UIR0 455 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 ERVK-11Q9UQG0 969 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 POMPQ9Y244 141 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 ASB4Q9Y574 426 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 MRPS18BQ9Y676 258 aaKnown RBP9.96□□□□□ -0.82
ATL3-204ENST00000540699 MAU2Q9Y6X3 613 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 DOCK10Q96BY6 2186 aa9.96□□□□□ -0.82
ATL3-204ENST00000540699 SPTA1P02549 2419 aa9.95□□□□□ -0.82
ATL3-204ENST00000540699 MAST4O15021 2626 aa9.95□□□□□ -0.82
ATL3-204ENST00000540699 SGK494L7N484 410 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms