RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 ZDHHC20Q5W0Z9 365 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 MSANTD1Q6ZTZ1 278 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 GANCQ8TET4 914 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 TP53INP1Q96A56 240 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 LRR1Q96L50 414 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 OPALINQ96PE5 141 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 TBX5Q99593 518 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 OR51I1Q9H343 314 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 SERHL2Q9H4I8 314 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 HHATLQ9HCP6 504 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 WDR37Q9Y2I8 494 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 PCDHGA4Q9Y5G9 962 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 CPSF4LA6NMK7 179 aaKnown RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 PDZK1P1A8MUH7 402 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 DNAJB5O75953 348 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 ARAFP10398 606 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 ELAVL4P26378 380 aaKnown RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 SLC15A1P46059 708 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 RACK1P63244 317 aaKnown RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 ZNF91Q05481 1191 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 LRIT3Q3SXY7 679 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 ARHGAP15Q53QZ3 475 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 PLAG1Q6DJT9 500 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 RNF165Q6ZSG1 346 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 DPPA4Q7L190 304 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 SIMC1Q8NDZ2 872 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 STARD8Q92502 1023 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 TRIM43Q96BQ3 446 aaPredicted RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 TIFAQ96CG3 184 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 PLA2G12AQ9BZM1 189 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 UCK2Q9BZX2 261 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 RACGAP1Q9H0H5 632 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 ANKMY1Q9P2S6 941 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 EIF3FO00303 357 aaPredicted RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 MYL12BO14950 172 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 FKTNO75072 461 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 UGT2B17O75795 530 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 H1F0P07305 194 aaKnown RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 ALOX5P09917 674 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 ADH5P11766 374 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 CBLP22681 906 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 SOX18P35713 384 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 NCBP2P52298 156 aaKnown RBP eCLIP13.38□□□□□ -0.271e-9■■■□□ 14.9
INO80E-203ENST00000540562 HNRNPA0Q13151 305 aaKnown RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 KCNC3Q14003 757 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 SPHARQ15513 63 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 SNAPC1Q16533 368 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 ZNF630Q2M218 657 aaPredicted RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 ACSM5Q6NUN0 579 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 LILRA6Q6PI73 481 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 OR6T1Q8NGN1 323 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 SMAP2Q8WU79 429 aaPredicted RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 ZFPM2Q8WW38 1151 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 FERD3LQ96RJ6 166 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 YIPF2Q9BWQ6 316 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 SLC6A17Q9H1V8 727 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 TP63Q9H3D4 680 aaPredicted RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 COMMD3Q9UBI1 195 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 KLHL3Q9UH77 587 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 ATP6V1HQ9UI12 483 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 NPIPB8E9PQR5 432 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 HMGN4O00479 90 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 PGRMC2O15173 223 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 LILRB3O75022 631 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 KRT75O95678 551 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 ADRB3P13945 408 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 MAN2A2P49641 1150 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 MRPS15P82914 257 aaKnown RBP13.38□□□□□ -0.27
INO80E-203ENST00000540562 ID2Q02363 134 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 FCHO2Q0JRZ9 810 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 CAMK1Q14012 370 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 GINS1Q14691 196 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 LRRC26Q2I0M4 334 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 PODNL1Q6PEZ8 512 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 TMEM107Q6UX40 140 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 FAM131AQ6UXB0 335 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 AMZ2Q86W34 360 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 OR4N5Q8IXE1 308 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 GHDCQ8N2G8 530 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 SLC6A18Q96N87 628 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 TBC1D17Q9HA65 648 aa13.38□□□□□ -0.27
INO80E-203ENST00000540562 DVL2O14641 736 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 PTPN2P17706 415 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 RHCEP18577 417 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 OR2B6P58173 313 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 EEF1A2Q05639 463 aaKnown RBP13.37□□□□□ -0.27
INO80E-203ENST00000540562 DMPKQ09013 629 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 FADDQ13158 208 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 CRB2Q5IJ48 1285 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 FAM46DQ8NEK8 389 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 TM4SF18Q96CE8 201 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 SLC30A2Q9BRI3 323 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 FNDC11Q9BVV2 318 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 C6orf106Q9H6K1 298 aaPredicted RBP13.37□□□□□ -0.27
INO80E-203ENST00000540562 KLHL42Q9P2K6 505 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 FTSJ1Q9UET6 329 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 DENND4CQ5VZ89 1909 aa13.37□□□□□ -0.27
INO80E-203ENST00000540562 FAM183AA6NL82 134 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms