RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 OR1E2P47887 323 aa21.14■□□□□ 0.98
HOMER3-204ENST00000539827 GFERP55789 205 aa21.14■□□□□ 0.98
HOMER3-204ENST00000539827 PPP2R2BQ00005 443 aa21.14■□□□□ 0.98
HOMER3-204ENST00000539827 MANEAQ5SRI9 462 aa21.14■□□□□ 0.98
HOMER3-204ENST00000539827 OR52E8Q6IFG1 317 aa21.14■□□□□ 0.98
HOMER3-204ENST00000539827 SHQ1Q6PI26 577 aaKnown RBP21.14■□□□□ 0.98
HOMER3-204ENST00000539827 TSEN54Q7Z6J9 526 aaKnown RBP21.14■□□□□ 0.98
HOMER3-204ENST00000539827 PATL1Q86TB9 770 aaKnown RBP21.14■□□□□ 0.98
HOMER3-204ENST00000539827 ST13P4Q8IZP2 240 aaPredicted RBP21.14■□□□□ 0.98
HOMER3-204ENST00000539827 LZICQ8WZA0 190 aa21.14■□□□□ 0.98
HOMER3-204ENST00000539827 USE1Q9NZ43 259 aa21.14■□□□□ 0.98
HOMER3-204ENST00000539827 SCN2AQ99250 2005 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 PRAMEF27A3QJZ7 478 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 SLC28A2O43868 658 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 HS6ST1O60243 411 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 GALR3O60755 368 aaPredicted RBP21.14■□□□□ 0.97
HOMER3-204ENST00000539827 IFNA14P01570 189 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 MYF6P23409 242 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 CLCN2P51788 898 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 XKP51811 444 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 ITGA1P56199 1179 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 ADARB1P78563 741 aaKnown RBP21.14■□□□□ 0.97
HOMER3-204ENST00000539827 ZXDAP98168 799 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 ID2Q02363 134 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 SRSF5Q13243 272 aaKnown RBP21.14■□□□□ 0.97
HOMER3-204ENST00000539827 ELOAQ14241 798 aaKnown RBP21.14■□□□□ 0.97
HOMER3-204ENST00000539827 LASP1Q14847 261 aaKnown RBP21.14■□□□□ 0.97
HOMER3-204ENST00000539827 SYPL1Q16563 259 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 NKAIN2Q5VXU1 208 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 DNAJC22Q8N4W6 341 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 OR4K14Q8NGD5 310 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 COL26A1Q96A83 441 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 TBC1D20Q96BZ9 403 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 C16orf58Q96GQ5 468 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 TGM7Q96PF1 710 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 RBM4BQ9BQ04 359 aaKnown RBP21.14■□□□□ 0.97
HOMER3-204ENST00000539827 RBM4Q9BWF3 364 aaKnown RBP21.14■□□□□ 0.97
HOMER3-204ENST00000539827 LYRM4Q9HD34 91 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 PDP2Q9P2J9 529 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 RNF215Q9Y6U7 377 aa21.14■□□□□ 0.97
HOMER3-204ENST00000539827 SDK1Q7Z5N4 2213 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 A0A1B0GTW7 788 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 PRAMEF25A6NGN4 478 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 RHPN2P1A8MT19 583 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 SGK494L7N484 410 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 EMC8O43402 210 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 TNFAIP8O95379 198 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 PGM3O95394 542 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 DHPSP49366 369 aaPredicted RBP21.13■□□□□ 0.97
HOMER3-204ENST00000539827 OLIG3Q7RTU3 272 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 OFCC1Q8IZS5 231 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 CA13Q8N1Q1 262 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 SDR16C5Q8N3Y7 309 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 NUP43Q8NFH3 380 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 ELP4Q96EB1 424 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 IER2Q9BTL4 223 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 RUBCNLQ9H714 662 aa21.13■□□□□ 0.97
HOMER3-204ENST00000539827 SAMHD1Q9Y3Z3 626 aaKnown RBP21.13■□□□□ 0.97
HOMER3-204ENST00000539827 HMGN2P05204 90 aaKnown RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 SMIM18P0DKX4 95 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 ALDH4A1P30038 563 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 DNAJA1P31689 397 aaKnown RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 YAP1P46937 504 aaKnown RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 KHKP50053 298 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 SIM2Q14190 667 aaPredicted RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 ZC3H12BQ5HYM0 836 aaKnown RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 LRRC25Q8N386 305 aaPredicted RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 TMEM52Q8NDY8 209 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 OR56A1Q8NGH5 318 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 NCSTNQ92542 709 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 TOR3AQ9H497 397 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 MS4A12Q9NXJ0 267 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 IFT80Q9P2H3 777 aaPredicted RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 PADI2Q9Y2J8 665 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 CACNA1IQ9P0X4 2223 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 FAM227AF5H4B4 570 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 NME6O75414 186 aaPredicted RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 SEC24DO94855 1032 aaPredicted RBP21.12■□□□□ 0.97
HOMER3-204ENST00000539827 FHP07954 510 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 SHC2P98077 582 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 ARL10Q8N8L6 244 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 ZNF696Q9H7X3 374 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 REEP1Q9H902 201 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 C3orf14Q9HBI5 128 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 EQTNQ9NQ60 294 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 PNPLA3Q9NST1 481 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 NDUFAF4Q9P032 175 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 LRIT1Q9P2V4 623 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 P2RX2Q9UBL9 471 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 KLHL3Q9UH77 587 aa21.12■□□□□ 0.97
HOMER3-204ENST00000539827 RDH16O75452 317 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 NR2F1P10589 423 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 MYF5P13349 255 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 FPR1P21462 350 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 BHLHB9Q6PI77 547 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 SLC25A45Q8N413 288 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 OR9A4Q8NGU2 314 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 DOK4Q8TEW6 326 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 MOAP1Q96BY2 351 aa21.11■□□□□ 0.97
HOMER3-204ENST00000539827 TCTN2Q96GX1 697 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms