RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 FAM91A1Q658Y4 838 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 CPZQ66K79 652 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 TMEM205Q6UW68 189 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 TRPM8Q7Z2W7 1104 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 OR9A2Q8NGT5 310 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 SNIP1Q8TAD8 396 aaKnown RBP21.99■■□□□ 1.11
TMEM260-202ENST00000538838 DOK4Q8TEW6 326 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 ZBED6CLQ96FA7 236 aaPredicted RBP21.99■■□□□ 1.11
TMEM260-202ENST00000538838 TMEM121BQ9BXQ6 578 aaPredicted RBP21.99■■□□□ 1.11
TMEM260-202ENST00000538838 FAM117AQ9C073 453 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 CCDC86Q9H6F5 360 aaKnown RBP21.99■■□□□ 1.11
TMEM260-202ENST00000538838 HS3ST3B1Q9Y662 390 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 PCSK5Q92824 1860 aa21.99■■□□□ 1.11
TMEM260-202ENST00000538838 A8MUA0 341 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 RNASET2O00584 256 aaKnown RBP21.98■■□□□ 1.11
TMEM260-202ENST00000538838 C6orf47O95873 294 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ATP1B1P05026 303 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 OTX2P32243 289 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 MANFP55145 182 aaKnown RBP21.98■■□□□ 1.11
TMEM260-202ENST00000538838 TERF2Q15554 542 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ANXA8L1Q5VT79 327 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 SLC2A7Q6PXP3 512 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 NATD1Q8N6N6 113 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ADCY4Q8NFM4 1077 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ZFP28Q8NHY6 868 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 KCNE4Q8WWG9 221 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 SLC25A23Q9BV35 468 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ACSS1Q9NUB1 689 aaPredicted RBP21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.98■■□□□ 1.11
TMEM260-202ENST00000538838 NUP214P35658 2090 aaPredicted RBP21.98■■□□□ 1.11
TMEM260-202ENST00000538838 IGHV3-20A0A0C4DH32 117 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 A0A1W2PP18 115 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 COX4I1P13073 169 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 NT5EP21589 574 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 MPIP34949 423 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 OR4D2P58180 307 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 EEF1A2Q05639 463 aaKnown RBP21.98■■□□□ 1.11
TMEM260-202ENST00000538838 CYLC2Q14093 348 aaPredicted RBP21.98■■□□□ 1.11
TMEM260-202ENST00000538838 TLR1Q15399 786 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 SFT2D3Q587I9 215 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ZNF248Q8NDW4 579 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 INPP5KQ9BT40 448 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ADAP2Q9NPF8 381 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 ARL8BQ9NVJ2 186 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 DKK4Q9UBT3 224 aa21.98■■□□□ 1.11
TMEM260-202ENST00000538838 PRSS51A0A1B0GVH4 220 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 DYTNA2CJ06 578 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 FBP2O00757 339 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 ANGPT2O15123 496 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 ABCB1P08183 1280 aaPredicted RBP21.97■■□□□ 1.11
TMEM260-202ENST00000538838 MMP11P24347 488 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 CDK9P50750 372 aaKnown RBP21.97■■□□□ 1.11
TMEM260-202ENST00000538838 MAPKAPK3Q16644 382 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 DNAJC14Q6Y2X3 702 aaPredicted RBP21.97■■□□□ 1.11
TMEM260-202ENST00000538838 MSANTD1Q6ZTZ1 278 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 PPP1R32Q7Z5V6 425 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 RETREG3Q86VR2 466 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 VPS37AQ8NEZ2 397 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 OR4A15Q8NGL6 344 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 TSPEARQ8WU66 669 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 RBM18Q96H35 190 aaKnown RBP21.97■■□□□ 1.11
TMEM260-202ENST00000538838 CCDC115Q96NT0 180 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 PELOQ9BRX2 385 aaKnown RBP21.97■■□□□ 1.11
TMEM260-202ENST00000538838 SERHLQ9NQF3 203 aa21.97■■□□□ 1.11
TMEM260-202ENST00000538838 C19orf25Q9UFG5 118 aaPredicted RBP21.97■■□□□ 1.11
TMEM260-202ENST00000538838 CREG1O75629 220 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 CPSF4O95639 269 aaKnown RBP21.96■■□□□ 1.11
TMEM260-202ENST00000538838 IGHEP01854 428 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 CDKN2CP42773 168 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 HBA1P69905 142 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 BIKQ13323 160 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 SSPNQ14714 243 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 ELAVL1Q15717 326 aaKnown RBP21.96■■□□□ 1.11
TMEM260-202ENST00000538838 PAGE3Q5JUK9 113 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 CPEB2Q7Z5Q1 589 aaKnown RBP21.96■■□□□ 1.11
TMEM260-202ENST00000538838 RP9Q8TA86 221 aaKnown RBP21.96■■□□□ 1.11
TMEM260-202ENST00000538838 OR5P2Q8WZ92 322 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 KAT2AQ92830 837 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 RMND5AQ9H871 391 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 BTNL2Q9UIR0 455 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 LEF1Q9UJU2 399 aaPredicted RBP21.96■■□□□ 1.11
TMEM260-202ENST00000538838 ERVK-11Q9UQG0 969 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 NDUFAF1Q9Y375 327 aa21.96■■□□□ 1.11
TMEM260-202ENST00000538838 SYNDIG1LA6NDD5 238 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 C17orf105B2RV13 164 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 SOCS6O14544 535 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 KLK10O43240 276 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 CT62P0C5K7 136 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 TNNI3P19429 210 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 WT1P19544 449 aaPredicted RBP21.95■■□□□ 1.1
TMEM260-202ENST00000538838 GPC1P35052 558 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 MRPS35P82673 323 aaKnown RBP21.95■■□□□ 1.1
TMEM260-202ENST00000538838 MLC1Q15049 377 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 PRICKLE4Q2TBC4 344 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 C6orf10Q5SRN2 563 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 REP15Q6BDI9 236 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 FAM111BQ6SJ93 734 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 TMEM107Q6UX40 140 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 GALNT12Q8IXK2 581 aa21.95■■□□□ 1.1
TMEM260-202ENST00000538838 PTPMT1Q8WUK0 201 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms