RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 HACL1Q9UJ83 578 aa6.38□□□□□ -1.39
USP28-207ENST00000538475 ZNF112Q9UJU3 913 aa6.38□□□□□ -1.39
USP28-207ENST00000538475 CBLCQ9ULV8 474 aa6.38□□□□□ -1.39
USP28-207ENST00000538475 NDRG2Q9UN36 371 aaKnown RBP6.38□□□□□ -1.39
USP28-207ENST00000538475 NEU3Q9UQ49 428 aa6.38□□□□□ -1.39
USP28-207ENST00000538475 CRYL1Q9Y2S2 319 aa6.38□□□□□ -1.39
USP28-207ENST00000538475 CFAP20Q9Y6A4 193 aaKnown RBP6.38□□□□□ -1.39
USP28-207ENST00000538475 DSPPQ9NZW4 1301 aa6.38□□□□□ -1.39
USP28-207ENST00000538475 A0A1B0GTQ1 180 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ANKRD61A6NGH8 418 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 H7C0S8 307 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 J3KR12 359 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 M0R233 179 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 MANBAO00462 879 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 OR7A17O14581 309 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 GATCO43716 136 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 CSO75390 466 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 PEX11BO96011 259 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 CSF2P04141 144 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 SRPRAP08240 638 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 FGF2P09038 288 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ACSM4P0C7M7 580 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ATXN1LP0C7T5 689 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 SULT1A3P0DMM9 295 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 SULT1A4P0DMN0 295 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 NR2F6P10588 404 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 BCKDHAP12694 445 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 CD53P19397 219 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 DNASE1P24855 282 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 AZGP1P25311 298 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 PRDX3P30048 256 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 GABRA5P31644 462 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 CCR1P32246 355 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 PTGER3P43115 390 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 KIR3DL1P43629 444 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 LIMS1P48059 325 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 IDH2P48735 452 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 TGM4P49221 684 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 RGS4P49798 205 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 NDUFV1P49821 464 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 MAP2K6P52564 334 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 HK3P52790 923 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 SMIM11AP58511 58 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 YBEYP58557 167 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 PITX1P78337 314 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 SHC2P98077 582 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 IL10RBQ08334 325 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 DBPQ10586 325 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 HNRNPA0Q13151 305 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 CAMK2DQ13557 499 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 NDUFA9Q16795 377 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 SLC39A12Q504Y0 691 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 SOWAHCQ53LP3 525 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 ZMAT1Q5H9K5 638 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ANXA8L1Q5VT79 327 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ELP2Q6IA86 826 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 FRMPD2BQ6IN97 320 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 RGS7BPQ6MZT1 257 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 SLC27A1Q6PCB7 646 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 CNIH2Q6PI25 160 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 DOK6Q6PKX4 331 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 CERS6Q6ZMG9 384 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 QSOX2Q6ZRP7 698 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 USP45Q70EL2 814 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 MRPL10Q7Z7H8 261 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 LRRTM3Q86VH5 581 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 LRRC28Q86X40 367 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 MIB1Q86YT6 1006 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 MCATQ8IVS2 390 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 CDH26Q8IXH8 852 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 FAM26EQ8N5C1 309 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 DCBLD1Q8N8Z6 715 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ZBTB44Q8NCP5 570 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 C11orf65Q8NCR3 313 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 AGBL3Q8NEM8 1001 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 TRPV1Q8NER1 839 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ATP6V1C2Q8NEY4 427 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 OR6M1Q8NGM8 313 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 OR2T4Q8NH00 348 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.37□□□□□ -1.39
USP28-207ENST00000538475 UBE2FQ969M7 185 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 MARC2Q969Z3 335 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 DACT3Q96B18 629 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 UPRTQ96BW1 309 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 CXorf40BQ96DE9 158 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ASIC4Q96FT7 647 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 WBP1Q96G27 269 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 CDKN2AIPNLQ96HQ2 116 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 ZBED3Q96IU2 234 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 PAWRQ96IZ0 340 aaKnown RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 LCORQ96JN0 433 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 TBATAQ96M53 351 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 RBP7Q96R05 134 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 BBS4Q96RK4 519 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 BEX2Q9BXY8 128 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 GLIS2Q9BZE0 524 aaPredicted RBP6.37□□□□□ -1.39
USP28-207ENST00000538475 ULBP1Q9BZM6 244 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 OR51J1Q9H342 316 aa6.37□□□□□ -1.39
USP28-207ENST00000538475 RNF167Q9H6Y7 350 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms