RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 C16orf74Q96GX8 76 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 SERINC2Q96SA4 455 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 C17orf62Q9BQA9 187 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 ATG101Q9BSB4 218 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 IDI2Q9BXS1 227 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 CUEDC2Q9H467 287 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 TERF2IPQ9NYB0 399 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 TAS2R16Q9NYV7 291 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 KLHL21Q9UJP4 597 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 PFASO15067 1338 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 ANKDD1BA6NHY2 528 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 PDXKO00764 312 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 CTDSPLO15194 276 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 LATO43561 262 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 TIMM44O43615 452 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 SELENOFO60613 162 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 RAD51DO75771 328 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 OR6A2O95222 327 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 SIX3O95343 332 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-208ENST00000537047 PRAMEF12O95522 483 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 ZFYP08048 801 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-208ENST00000537047 PPP2R1BP30154 601 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 IL2RGP31785 369 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 IER3P46695 156 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 AKAP17AQ02040 695 aaKnown RBP2.98□□□□□ -1.93
CCDC7-208ENST00000537047 SLC3A1Q07837 685 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 EBI3Q14213 229 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 TFDP3Q5H9I0 405 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 PM20D1Q6GTS8 502 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 IRGCQ6NXR0 463 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 APOBEC3FQ8IUX4 373 aaKnown RBP2.98□□□□□ -1.93
CCDC7-208ENST00000537047 OR13F1Q8NGS4 319 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 ZNF721Q8TF20 911 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 SPATA17Q96L03 361 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 EDEM3Q9BZQ6 932 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 ETV7Q9Y603 341 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 TNRQ92752 1358 aa2.98□□□□□ -1.93
CCDC7-208ENST00000537047 RNF212BA8MTL3 300 aa2.97□□□□□ -1.93
CCDC7-208ENST00000537047 A8MX80 341 aa2.97□□□□□ -1.93
CCDC7-208ENST00000537047 M0R296 226 aa2.97□□□□□ -1.93
CCDC7-208ENST00000537047 IFIT3O14879 490 aaKnown RBP2.97□□□□□ -1.93
CCDC7-208ENST00000537047 HSPB1P04792 205 aaKnown RBP2.97□□□□□ -1.93
CCDC7-208ENST00000537047 CCND3P30281 292 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-208ENST00000537047 PTK6Q13882 451 aa2.97□□□□□ -1.93
CCDC7-208ENST00000537047 SIX6OS1Q8N1H7 587 aa2.97□□□□□ -1.93
CCDC7-208ENST00000537047 Q8N9G6 341 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-208ENST00000537047 KIR2DL5BQ8NHK3 375 aa2.97□□□□□ -1.93
CCDC7-208ENST00000537047 CITED2Q99967 270 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-208ENST00000537047 GPR173Q9NS66 373 aa2.97□□□□□ -1.93
CCDC7-208ENST00000537047 IMPAD1Q9NX62 359 aa2.97□□□□□ -1.93
CCDC7-208ENST00000537047 CHD4Q14839 1912 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 GJB5O95377 273 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 PDGFBP01127 241 aaPredicted RBP2.96□□□□□ -1.94
CCDC7-208ENST00000537047 GSTA2P09210 222 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 FKBP1BP68106 108 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 ASAH1Q13510 395 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 EMC2Q15006 297 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 ACKR1Q16570 336 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 IQCCQ4KMZ1 466 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 MSANTD1Q6ZTZ1 278 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 ARL14Q8N4G2 192 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 CHDHQ8NE62 594 aaPredicted RBP2.96□□□□□ -1.94
CCDC7-208ENST00000537047 OR4F5Q8NH21 305 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 DEPDC1BQ8WUY9 529 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 CCDC114Q96M63 670 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 OR5M11Q96RB7 305 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 THUMPD3Q9BV44 507 aaKnown RBP2.96□□□□□ -1.94
CCDC7-208ENST00000537047 DPEP3Q9H4B8 488 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 ELL3Q9HB65 397 aaPredicted RBP2.96□□□□□ -1.94
CCDC7-208ENST00000537047 TIGARQ9NQ88 270 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 TMEM161AQ9NX61 479 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 SLCO1C1Q9NYB5 712 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 VPS18Q9P253 973 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 ITM2BQ9Y287 266 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 CA5BQ9Y2D0 317 aa2.96□□□□□ -1.94
CCDC7-208ENST00000537047 SLC15A5A6NIM6 579 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 HSPA4LO95757 839 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 SCG2P13521 617 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 EZRP15311 586 aaKnown RBP2.95□□□□□ -1.94
CCDC7-208ENST00000537047 CASTP20810 708 aaKnown RBP2.95□□□□□ -1.94
CCDC7-208ENST00000537047 ARHGDIAP52565 204 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 QRICH1Q2TAL8 776 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 UNC50Q53HI1 259 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 OTPQ5XKR4 325 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 VSIG1Q86XK7 387 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 RNF175Q8N4F7 328 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 ICA1LQ8NDH6 482 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 TCP11Q8WWU5 503 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 CRYGNQ8WXF5 182 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 PNPLA2Q96AD5 504 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 C16orf58Q96GQ5 468 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 LRRC2Q9BYS8 371 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 NMUR2Q9GZQ4 415 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 CYTL1Q9NRR1 136 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 GIMAP2Q9UG22 337 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 ARMCX3Q9UH62 379 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-208ENST00000537047 GPR132Q9UNW8 380 aa2.95□□□□□ -1.94
CCDC7-208ENST00000537047 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
CCDC7-208ENST00000537047 CCSO14618 274 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms