RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 OR4N5Q8IXE1 308 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 HORMAD2Q8N7B1 307 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ZNF321PQ8N8H1 164 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TMEM178AQ8NBL3 297 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MORN4Q8NDC4 146 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 OR14A16Q8NHC5 309 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SELENOMQ8WWX9 145 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 C5orf34Q96MH7 638 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 RPF2Q9H7B2 306 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PHF11Q9UIL8 331 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ASB4Q9Y574 426 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MAST4O15021 2626 aa16.61■□□□□ 0.25
TNFRSF1A-209ENST00000536717 C17orf105B2RV13 164 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 AZIN1O14977 448 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PROM1O43490 865 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ULK1O75385 1050 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ITGA10O75578 1167 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SEMA3DO95025 777 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 STSP08842 583 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 UROSP10746 265 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 HLCSP50747 726 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 C4orf17Q53FE4 359 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CES4AQ5XG92 561 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 C16orf47Q6ZP98 133 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FAM76AQ8TAV0 307 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 LRRC8CQ8TDW0 803 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FRMD6Q96NE9 622 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 KCNA7Q96RP8 456 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SERPINI1Q99574 410 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 OR8D2Q9GZM6 311 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 LIN28AQ9H9Z2 209 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 THAP1Q9NVV9 213 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TIMM22Q9Y584 194 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 NINQ8N4C6 2090 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CACNA1DQ01668 2161 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MANBAO00462 879 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 KLF11O14901 512 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ITM2AO43736 263 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 NME2P1O60361 137 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 LYPLA1O75608 230 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ZFAND5O76080 213 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CHEK2O96017 543 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FGF4P08620 206 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 NME2P22392 152 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ARRB2P32121 409 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FOXA1P55317 472 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FOLH1Q04609 750 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MAPKAPK3Q16644 382 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SGO1Q5FBB7 561 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SH2D4BQ5SQS7 431 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 GFRALQ6UXV0 394 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 NUDT13Q86X67 352 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 KIRREL3Q8IZU9 778 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 AGR3Q8TD06 166 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SLC2A12Q8TD20 617 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ZNF75CPQ92670 426 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TANKQ92844 425 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 LYARQ9NX58 379 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FIS1Q9Y3D6 152 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TRAF6Q9Y4K3 522 aa16.6■□□□□ 0.25
TNFRSF1A-209ENST00000536717 A0A1W2PR48 441 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 WASHC1A8K0Z3 465 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 LRRTM2O43300 516 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 UNC5CO95185 931 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 GBAP04062 536 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FAM58BPP0C7Q3 252 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TNNI3P19429 210 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TLX1P31314 330 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 BUD31P41223 144 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 STT3AP46977 705 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TCHHL1Q5QJ38 904 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CLEC6AQ6EIG7 209 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CYP20A1Q6UW02 462 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 DGAT2L6Q6ZPD8 337 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 CLYBLQ8N0X4 340 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ZNF721Q8TF20 911 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 UCN3Q969E3 161 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 ZNF395Q9H8N7 513 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 BRF2Q9HAW0 419 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 TNFRSF12AQ9NP84 129 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 FARSBQ9NSD9 589 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 MYOTQ9UBF9 498 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 SEC14L3Q9UDX4 400 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 PLEKHB1Q9UF11 243 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 YARS2Q9Y2Z4 477 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 RAP2CQ9Y3L5 183 aa16.59■□□□□ 0.25
TNFRSF1A-209ENST00000536717 NCOA6Q14686 2063 aaPredicted RBP16.58■□□□□ 0.25
TNFRSF1A-209ENST00000536717 OR2J2O76002 312 aa16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 PDYNP01213 254 aa16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 FREM3P0C091 2139 aa16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 KANK2Q63ZY3 851 aa16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 HSDL2Q6YN16 418 aa16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CYP4Z2PQ8N1L4 340 aa16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 TMEM156Q8N614 296 aa16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CPSF7Q8N684 471 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 FAM98AQ8NCA5 519 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 C7orf57Q8NEG2 295 aa16.58■□□□□ 0.24
TNFRSF1A-209ENST00000536717 CKAP2Q8WWK9 683 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms