RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TDRD6O60522 2096 aaKnown RBP7.55□□□□□ -1.2
COL21A1-212ENST00000535941 LY6G6EA0A0G2JKS1 128 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 A0A1W2PPW3 197 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 PRR23AA6NEV1 266 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CYR61O00622 381 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 AKAP10O43572 662 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ASNA1O43681 348 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 GUCY1B2O75343 617 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 H6PDO95479 791 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 AIFM1O95831 613 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 BCKDHBP21953 392 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CAPZBP47756 277 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 BLKP51451 505 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 HMGA2P52926 109 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 MAPK12P53778 367 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ATXN3P54252 364 aaPredicted RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CDH15P55291 814 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 TPTEP56180 551 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 TNFRSF17Q02223 184 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 DMWDQ09019 674 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ILF3Q12906 894 aaKnown RBP eCLIP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 DDX39BQ13838 428 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 TEAD4Q15561 434 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CCDC85BQ15834 202 aaPredicted RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 FAHD1Q6P587 224 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SHQ1Q6PI26 577 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ASPGQ86U10 573 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 LGI4Q8N135 537 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 PATE1Q8WXA2 126 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CNRIP1Q96F85 164 aaPredicted RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SLC47A1Q96FL8 570 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 KLHDC7BQ96G42 594 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SERINC2Q96SA4 455 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SLC35A5Q9BS91 424 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 C9orf16Q9BUW7 83 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 RAD21L1Q9H4I0 556 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 BCL2L10Q9HD36 194 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CDC14AQ9UNH5 594 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ATG4BQ9Y4P1 393 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 U3KQA8 63 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 MN1Q10571 1320 aaPredicted RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 PDE4DIPQ5VU43 2346 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 RTCAO00442 366 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 HMGN4O00479 90 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SERPINA1P01009 418 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 GBAP04062 536 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 IL10P22301 178 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 BMXP51813 675 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 RPS3AP61247 264 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 MGAT2Q10469 447 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ZNF630Q2M218 657 aaPredicted RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 TOR1AIP1Q5JTV8 583 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 NDUFAF5Q5TEU4 345 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 OR7G1Q8NGA0 311 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 OR4E2Q8NGC2 313 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ZDHHC1Q8WTX9 485 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 MOAP1Q96BY2 351 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CTHRC1Q96CG8 243 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 EPYCQ99645 322 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SRMSQ9H3Y6 488 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ZNF304Q9HCX3 659 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 PRDM6Q9NQX0 595 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ZMAT5Q9UDW3 170 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 PCDHGA8Q9Y5G5 932 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 A0A1W2PRB8 838 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 LMO7DNF2Z398 122 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 PDPK1O15530 556 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 EPPINO95925 133 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 GSNP06396 782 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CTSKP43235 329 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ALDH3A2P51648 485 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 STXBP1P61764 594 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ZXDAP98168 799 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 FAM98BQ52LJ0 330 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 GPR107Q5VW38 600 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 FRMPD2BQ6IN97 320 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SRFBP1Q8NEF9 429 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 FAM120BQ96EK7 910 aaKnown RBP7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ACAT2Q9BWD1 397 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 ROGDIQ9GZN7 287 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CD320Q9NPF0 282 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 OAZ3Q9UMX2 235 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 SNX11Q9Y5W9 270 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 CCDC88CQ9P219 2028 aa7.54□□□□□ -1.2
COL21A1-212ENST00000535941 GNG14A0A1W2PPG7 69 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 PDZK1P1A8MUH7 402 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 HCRTR1O43613 425 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 PRKD3O94806 890 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 SLITRK5O94991 958 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 ITGAMP11215 1152 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
COL21A1-212ENST00000535941 LIM2P55344 173 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 SELENOWP63302 87 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 MOGQ16653 247 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 FIGLAQ6QHK4 219 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 RFPL4BQ6ZWI9 263 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 USP53Q70EK8 1073 aa7.53□□□□□ -1.2
COL21A1-212ENST00000535941 ZC3H7AQ8IWR0 971 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms