RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 RD3Q7Z3Z2 195 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 BTLAQ7Z6A9 289 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 OR4E2Q8NGC2 313 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 CCL4L1Q8NHW4 92 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 PHF10Q8WUB8 498 aaKnown RBP12.66□□□□□ -0.38
VPS33B-202ENST00000535906 AMDHD1Q96NU7 426 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 FBXO8Q9NRD0 319 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 BRWD1Q9NSI6 2320 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 PRAMEF27A3QJZ7 478 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 A8MVJ9 347 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 MAN2B1O00754 1011 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 FFAR1O14842 300 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 PGRMC2O15173 223 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 MFN2O95140 757 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 LCKP06239 509 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 DRD2P14416 443 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 POU2F1P14859 743 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 DDX5P17844 614 aaKnown RBP12.66□□□□□ -0.38
VPS33B-202ENST00000535906 RHCEP18577 417 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 HIST1H1TP22492 207 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ACSL1P33121 698 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 TGFBR2P37173 567 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 LIM2P55344 173 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 NCS1P62166 190 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ABATP80404 500 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 SLC9A5Q14940 896 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 MLC1Q15049 377 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 TMEM31Q5JXX7 168 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ABHD17CQ6PCB6 329 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 SZRD1Q7Z422 152 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ACOT4Q8N9L9 421 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 GPR32P1Q8NGA4 272 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 FCGR1BQ92637 280 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 LGALS12Q96DT0 336 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 MRGPRX1Q96LB2 322 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 COPS4Q9BT78 406 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 FBRSQ9HAH7 460 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 SLC35C2Q9NQQ7 365 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 POFUT2Q9Y2G5 429 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 FAM32AQ9Y421 112 aaKnown RBP12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ATG4BQ9Y4P1 393 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ASB4Q9Y574 426 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 PCDHGA2Q9Y5H1 932 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 PMF1-BGLAPU3KQ54 211 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 A0A1W2PR48 441 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 ISM1B1AKI9 464 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 KPNA4O00629 521 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-202ENST00000535906 SEMA7AO75326 666 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 GADD45GO95257 159 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 IFNW1P05000 195 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 CD36P16671 472 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 AHRP35869 848 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 BCAP31P51572 246 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 ADCK1Q86TW2 530 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 OR5D16Q8NGK9 328 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 TSACCQ96A04 125 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-202ENST00000535906 ITPAQ9BY32 194 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 ALOXE3Q9BYJ1 711 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 KIR3DX1Q9H7L2 352 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 CLDND1Q9NY35 253 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 EHD3Q9NZN3 535 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 PSORS1C1Q9UIG5 152 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 COLEC10Q9Y6Z7 277 aa12.65□□□□□ -0.38
VPS33B-202ENST00000535906 TRBV23OR9-2A0A075B6M9 112 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 ANHXE9PGG2 379 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 ERAL1O75616 437 aaKnown RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 OR12D1P0DN82 309 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 ALPPL2P10696 532 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 ATP5A1P25705 553 aaKnown RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 NCBP2P52298 156 aaKnown RBP eCLIP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 RAB8AP61006 207 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 TFF2Q03403 129 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 SYPL1Q16563 259 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF750Q32MQ0 723 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 TOR1AIP1Q5JTV8 583 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 MRM1Q6IN84 353 aaKnown RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 AMIGO1Q86WK6 493 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 OR2L5Q8NG80 312 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 OR6Q1Q8NGQ2 317 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 RHOXF1Q8NHV9 184 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 BMFQ96LC9 184 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 FCRL4Q96PJ5 515 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 ALPK1Q96QP1 1244 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 WFDC6Q9BQY6 131 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 SARGQ9BW04 601 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 BTBD2Q9BX70 525 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF624Q9P2J8 865 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 APOBEC3BQ9UH17 382 aaKnown RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 SCML1Q9UN30 329 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 NCKAP1Q9Y2A7 1128 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 HEBP2Q9Y5Z4 205 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 TRIOO75962 3097 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 A0A1W2PS29 197 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 NARSO43776 548 aaKnown RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 CHRM5P08912 532 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-202ENST00000535906 CERS1P27544 350 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 CMPK1P30085 196 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 GPC1P35052 558 aa12.64□□□□□ -0.39
VPS33B-202ENST00000535906 LTBRP36941 435 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms