RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RIT1Q92963 219 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 FBXL20Q96IG2 436 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 ILKAPQ9H0C8 392 aaPredicted RBP21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 SLAMF7Q9NQ25 335 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 HAO1Q9UJM8 370 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 PSME2Q9UL46 239 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 RAP2CQ9Y3L5 183 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 PCDHGA10Q9Y5H3 936 aa21.14■□□□□ 0.97
SFSWAP-204ENST00000535399 OR5H15A6NDH6 313 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 TMEM200CA6NKL6 621 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 GABRR3A8MPY1 467 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 DYRK3O43781 588 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 SASH3O75995 380 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 SNUPNO95149 360 aaKnown RBP21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 PLA2G2AP14555 144 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 PORP16435 677 aaPredicted RBP21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 ST13P50502 369 aaKnown RBP21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 DUSP2Q05923 314 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 ZNF169Q14929 603 aaPredicted RBP21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 HEPACAMQ14CZ8 416 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 RFTN2Q52LD8 501 aaPredicted RBP21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 FAM71E1Q6IPT2 247 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 HSDL2Q6YN16 418 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 THAP3Q8WTV1 239 aaPredicted RBP21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 KLHL29Q96CT2 875 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 CNRIP1Q96F85 164 aaPredicted RBP21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 C3orf30Q96M34 536 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 ZNF681Q96N22 645 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 CXorf21Q9HAI6 301 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 MYNNQ9NPC7 610 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 ABI3Q9P2A4 366 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 UTS2RQ9UKP6 389 aa21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 WBP11Q9Y2W2 641 aaKnown RBP21.13■□□□□ 0.97
SFSWAP-204ENST00000535399 SKAP2O75563 359 aaPredicted RBP21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 ERAL1O75616 437 aaKnown RBP21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 TACR1P25103 407 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 FEN1P39748 380 aaKnown RBP21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 MLLT10P55197 1068 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 ERVK-8P63133 956 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 TLE1Q04724 770 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 TUBA3CQ13748 450 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 ZNF267Q14586 743 aaPredicted RBP21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 TUBA3EQ6PEY2 450 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 OR8K3Q8NH51 312 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 ART5Q96L15 291 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 CNPPD1Q9BV87 410 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 EHD3Q9NZN3 535 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 COPS7AQ9UBW8 275 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 GIMAP2Q9UG22 337 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 EXO1Q9UQ84 846 aaKnown RBP21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 ERVK-19Q9WJR5 959 aa21.12■□□□□ 0.97
SFSWAP-204ENST00000535399 TRAV17A0A0B4J275 112 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 TTLL8A6PVC2 850 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 CT62P0C5K7 136 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 CSNK2A2P19784 350 aaPredicted RBP21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 DDCP20711 480 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 CD96P40200 585 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 RPL38P63173 70 aaKnown RBP21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 RNF4P78317 190 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 C2orf80Q0P641 193 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 ZNF468Q5VIY5 522 aaPredicted RBP21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 FAM180BQ6P0A1 224 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 C16orf47Q6ZP98 133 aaPredicted RBP21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 CDC26Q8NHZ8 85 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 EGLN2Q96KS0 407 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 PPP3R2Q96LZ3 170 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 CCT7Q99832 543 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 TRIM4Q9C037 500 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 LIN28AQ9H9Z2 209 aaKnown RBP21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 ANKRD10Q9NXR5 420 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 TMED5Q9Y3A6 229 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 ZNF780BQ9Y6R6 833 aa21.11■□□□□ 0.97
SFSWAP-204ENST00000535399 FASNP49327 2511 aaKnown RBP21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 CDK2AP1O14519 115 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 CLPSP04118 112 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 ATP1B1P05026 303 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 JUNP05412 331 aaKnown RBP21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 SDC1P18827 310 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 NT5EP21589 574 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 TRHRP34981 398 aaPredicted RBP21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 PRSS53Q2L4Q9 553 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 GALNTL6Q49A17 601 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 PRR30Q53SZ7 412 aaPredicted RBP21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 IKBIPQ70UQ0 350 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 GALNT12Q8IXK2 581 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 MDS2Q8NDY4 140 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 EXOSC8Q96B26 276 aaKnown RBP21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 C19orf60Q96EN9 201 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 SIGLEC12Q96PQ1 595 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 UTP23Q9BRU9 249 aaKnown RBP21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 TRIM45Q9H8W5 580 aaPredicted RBP21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 SLC35C2Q9NQQ7 365 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 MYOTQ9UBF9 498 aa21.1■□□□□ 0.97
SFSWAP-204ENST00000535399 CPAMD8Q8IZJ3 1885 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 ATP6AP2A0A1C7CYW4 349 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 FCHO1O14526 889 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 PRAMEF2O60811 474 aa21.09■□□□□ 0.97
SFSWAP-204ENST00000535399 PEX11AO75192 247 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms