RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 EBNA1BP2Q99848 306 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 HRH4Q9H3N8 390 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 ZDHHC7Q9NXF8 308 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 SLC38A8A6NNN8 435 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 B3GALT2O43825 422 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 POP4O95707 220 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 MT-ND2P03891 347 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 PRKACGP22612 351 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 PPIBP23284 216 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 ADH6P28332 368 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 HADHBP55084 474 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 FRRS1Q6ZNA5 592 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 OSTM1Q86WC4 334 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 CARM1Q86X55 608 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 TDRPQ86YL5 185 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 ZNF784Q8NCA9 323 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 CHDHQ8NE62 594 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 PXT1Q8NFP0 134 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 DNAJB8Q8NHS0 232 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 MFSD14AQ96MC6 490 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 SGIP1Q9BQI5 828 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 POTEKPQ9BYX7 375 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 CRLF2Q9HC73 371 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 KCNJ16Q9NPI9 418 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 ACAD8Q9UKU7 415 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 EXOGQ9Y2C4 368 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 PCDHGB7Q9Y5F8 929 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 CPSF4LA6NMK7 179 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 C9J4A7 227 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 AQP7O14520 342 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 TERTO14746 1132 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 PCDH17O14917 1159 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 SYN3O14994 580 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 LGI1O95970 557 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 CYB5AP00167 134 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 NQO2P16083 231 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 CAPN3P20807 821 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 PROZP22891 400 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 SSTR4P31391 388 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 TAS2R39P59534 338 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 GRIK2Q13002 908 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 MED27Q6P2C8 311 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 JOSD2Q8TAC2 188 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 NSMAFQ92636 917 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 HMCESQ96FZ2 354 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 LRTM1Q9HBL6 345 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 TAS2R10Q9NYW0 307 aa6.69□□□□□ -1.34
TGFBR3-210ENST00000533089 NUP188Q5SRE5 1749 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 LOC105369274A0A096LPK9 316 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 LOC102723532A0A0G2JNH3 316 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 ADAMDEC1O15204 470 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 KERAO60938 352 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 ALPIP09923 528 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 SPATA31C1P0DKV0 1188 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 GM2AP17900 193 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 AGXTP21549 392 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 DRD5P21918 477 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 DCKP27707 260 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 SMSP52788 366 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 RGS8P57771 180 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 TAS2R40P59535 323 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 JAG1P78504 1218 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 SEMG2Q02383 582 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 CHRNEQ04844 493 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 NFATC2Q13469 925 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 OXA1LQ15070 435 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 ZNF792Q3KQV3 632 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 FBXO48Q5FWF7 155 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 MAML2Q8IZL2 1156 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 OR4N4Q8N0Y3 316 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 SLC22A17Q8WUG5 538 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 DCAKDQ8WVC6 231 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 CNOT9Q92600 299 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 ALG3Q92685 438 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 UTP4Q969X6 686 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 TRAF4Q9BUZ4 470 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 EBPLQ9BY08 206 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 MFFQ9GZY8 342 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 MYEF2Q9P2K5 600 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 SALL4Q9UJQ4 1053 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 PCDHGC4Q9Y5F7 938 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 A0A087X0M5 115 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 A0A1B0GX30 115 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 CXCR6O00574 342 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 ST8SIA5O15466 376 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 MT-CYBP00156 380 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 FHP07954 510 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 PKMP14618 531 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 ZNF8P17098 575 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 RPL10P27635 214 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 CLCN7P51798 805 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 TEKQ02763 1124 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 TARDBPQ13148 414 aaKnown RBP eCLIP6.68□□□□□ -1.342e-8■■■■■ 34.5
TGFBR3-210ENST00000533089 ALKBH1Q13686 389 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 CCINQ13939 588 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 GCNT6Q5T4J0 391 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 LRRC38Q5VT99 294 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 SFRP4Q6FHJ7 346 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 GSG1LQ6UXU4 331 aa6.68□□□□□ -1.34
TGFBR3-210ENST00000533089 PXKQ7Z7A4 578 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms