RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SPAG7O75391 227 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 CRCPO75575 148 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 NME2P22392 152 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 MST1P26927 711 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 GALNSP34059 522 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 TRA2BP62995 288 aaKnown RBP14.26□□□□□ -0.13
CPSF1-210ENST00000532935 ERVK-8P63133 956 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 HMGCS1Q01581 520 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 SRSF11Q05519 484 aaKnown RBP14.26□□□□□ -0.13
CPSF1-210ENST00000532935 SPIN4Q56A73 249 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 SCIMPQ6UWF3 145 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 FAM98AQ8NCA5 519 aaKnown RBP14.26□□□□□ -0.13
CPSF1-210ENST00000532935 DOK4Q8TEW6 326 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 ASB15Q8WXK1 588 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 RIT1Q92963 219 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 TMEM125Q96AQ2 219 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 APIPQ96GX9 242 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 FAM111AQ96PZ2 611 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 RASL10BQ96S79 203 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 SMC6Q96SB8 1091 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 CNPPD1Q9BV87 410 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 TNFRSF12AQ9NP84 129 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF446Q9NWS9 450 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 SLC17A7Q9P2U7 560 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 MCM8Q9UJA3 840 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 CES1P1Q9UKY3 287 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 ERVK-19Q9WJR5 959 aa14.26□□□□□ -0.13
CPSF1-210ENST00000532935 SPTAN1Q13813 2472 aaKnown RBP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 EXPH5Q8NEV8 1989 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 DIDO1Q9BTC0 2240 aaKnown RBP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 PCDH7O60245 1069 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 TRIM13O60858 407 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 OR6B1O95007 311 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 AGFG2O95081 481 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 XKP51811 444 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 RAE1P78406 368 aaKnown RBP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF844Q08AG5 666 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 ACSM2AQ08AH3 577 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 GTF3C1Q12789 2109 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF267Q14586 743 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 KRT71Q3SY84 523 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 ACSM2BQ68CK6 577 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 SLC48A1Q6P1K1 146 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 C9orf40Q8IXQ3 194 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 GPALPP1Q8IXQ4 340 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 MMP21Q8N119 569 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 NUBPLQ8TB37 319 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 TCP10LQ8TDR4 215 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 FRMD6Q96NE9 622 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 FAIM2Q9BWQ8 316 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 GATA5Q9BWX5 397 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 SHCBP1LQ9BZQ2 653 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 CXorf21Q9HAI6 301 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 ERVK-11Q9UQG0 969 aa14.25□□□□□ -0.13
CPSF1-210ENST00000532935 KLF13Q9Y2Y9 288 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 SPTBN1Q01082 2364 aaKnown RBP14.25□□□□□ -0.13
CPSF1-210ENST00000532935 A8MVJ9 347 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 UROSP10746 265 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 CPMP14384 443 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 CREB1P16220 341 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 PORP16435 677 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-210ENST00000532935 SERPINB3P29508 390 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 ALDH3A1P30838 453 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 SOX3P41225 446 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 SLC37A1P57057 533 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 BTKQ06187 659 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 ASPHQ12797 758 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 CASP8Q14790 479 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 MPEG1Q2M385 716 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF750Q32MQ0 723 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 SPDYAQ5MJ70 313 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 IL20RBQ6UXL0 311 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 RNF111Q6ZNA4 994 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 TRIM46Q7Z4K8 759 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 MDGA2Q7Z553 956 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 TRMOQ9BU70 441 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 MECRQ9BV79 373 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 HPF1Q9NWY4 346 aa14.24□□□□□ -0.13
CPSF1-210ENST00000532935 GNG14A0A1W2PPG7 69 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 GOLGA6L10A6NI86 522 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 RGS16O15492 202 aaPredicted RBP14.23□□□□□ -0.13
CPSF1-210ENST00000532935 ZNF354AO60765 605 aaPredicted RBP14.23□□□□□ -0.13
CPSF1-210ENST00000532935 ERAL1O75616 437 aaKnown RBP14.23□□□□□ -0.13
CPSF1-210ENST00000532935 CLPSP04118 112 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 NT5EP21589 574 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 TIA1P31483 386 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPSF1-210ENST00000532935 ALDH9A1P49189 494 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 KCNK10P57789 538 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 ALDH6A1Q02252 535 aaKnown RBP14.23□□□□□ -0.13
CPSF1-210ENST00000532935 IMPG1Q17R60 797 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 PIGGQ5H8A4 983 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 CLEC6AQ6EIG7 209 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 GALNT18Q6P9A2 607 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 GFRALQ6UXV0 394 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 SLC29A4Q7RTT9 530 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 SULF2Q8IWU5 870 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 GALNT12Q8IXK2 581 aa14.23□□□□□ -0.13
CPSF1-210ENST00000532935 CPSF7Q8N684 471 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms