RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.56□□□□□ -0.24
TTC39A-216ENST00000530004 BPHLQ86WA6 291 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-216ENST00000530004 PPP1R3BQ86XI6 285 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 GPR135Q8IZ08 494 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 PQLC1Q8N2U9 271 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 CNRIP1Q96F85 164 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-216ENST00000530004 BBS4Q96RK4 519 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 TACO1Q9BSH4 297 aaKnown RBP13.56□□□□□ -0.24
TTC39A-216ENST00000530004 GLIPR2Q9H4G4 154 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 GORASP2Q9H8Y8 452 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 IRAK4Q9NWZ3 460 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 SATB2Q9UPW6 733 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 ENTPD4Q9Y227 616 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 RNF103-CHMP3A0A140T963 221 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 PMS2P1A4D2B8 440 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 FITM1A5D6W6 292 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 GPIP06744 558 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 JMJD7P0C870 316 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 FGF5P12034 268 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 UQCRC2P22695 453 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 PSMA4P25789 261 aaKnown RBP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 GCKP35557 465 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ETV5P41161 510 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ID4P47928 161 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 CDK9P50750 372 aaKnown RBP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 NCBP2P52298 156 aaKnown RBP eCLIP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 C3orf38Q5JPI3 329 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 CPZQ66K79 652 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 TLDC1Q6P9B6 456 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ZZZ3Q8IYH5 903 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ARHGEF39Q8N4T4 335 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 OR52N2Q8NGI0 321 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 NCLNQ969V3 563 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 FAM162AQ96A26 154 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 AMDHD1Q96NU7 426 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 CSF3RQ99062 836 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 CTRCQ99895 268 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 DPH2Q9BQC3 489 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 SPATA9Q9BWV2 254 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 TMEM121BQ9BXQ6 578 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 CHST8Q9H2A9 424 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 LYRM4Q9HD34 91 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 SIRT3Q9NTG7 399 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 CCM2LQ9NUG4 571 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 GPATCH2Q9NW75 528 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 SLC39A1Q9NY26 324 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 C6orf203Q9P0P8 240 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 PISDQ9UG56 409 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 AURKCQ9UQB9 309 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ADAMTS20P59510 1910 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 KRT75O95678 551 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 TLX1P31314 330 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-216ENST00000530004 VHLP40337 213 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 CRATP43155 626 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 MVDP53602 400 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 CASP9P55211 416 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 RAB15P59190 212 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 MAP7Q14244 749 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 GRM7Q14831 915 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 VMACQ2NL98 169 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ZNF750Q32MQ0 723 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 MTX3Q5HYI7 312 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 TBCELQ5QJ74 424 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 COX20Q5RI15 118 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 PRAMEF17Q5VTA0 474 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ERICH5Q6P6B1 374 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 PTOV1Q86YD1 416 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ADGRG5Q8IZF4 528 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 OR5T3Q8NGG3 340 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ZFP28Q8NHY6 868 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 EFHD1Q9BUP0 239 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 ANKHQ9HCJ1 492 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 GIMAP4Q9NUV9 329 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 MS4A12Q9NXJ0 267 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 PSME2Q9UL46 239 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 V9GYQ6 96 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 SPACA6W5XKT8 324 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 KNTC1P50748 2209 aa13.55□□□□□ -0.24
TTC39A-216ENST00000530004 MYO1GB0I1T2 1018 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 SGK494L7N484 410 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 CREG1O75629 220 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 TIAF1O95411 115 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 NUDT7P0C024 238 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 C8orf89P0DMQ9 161 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 UMPSP11172 480 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 ETFAP13804 333 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 GPC1P35052 558 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 FEN1P39748 380 aaKnown RBP13.54□□□□□ -0.24
TTC39A-216ENST00000530004 GCGRP47871 477 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 MAPK10P53779 464 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 EMP3P54852 163 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 DUSP2Q05923 314 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 ADRM1Q16186 407 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 NDUFA9Q16795 377 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 SPDYE7PQ495Y7 208 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
TTC39A-216ENST00000530004 IRAK1BP1Q5VVH5 260 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 PWWP2BQ6NUJ5 590 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 RNF130Q86XS8 419 aa13.54□□□□□ -0.24
TTC39A-216ENST00000530004 CCDC116Q8IYX3 515 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms