RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 NTRK2Q16620 822 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 BAG1Q99933 345 aaPredicted RBP17.3■□□□□ 0.36
SSRP1-204ENST00000529002 SORBS1Q9BX66 1292 aaKnown RBP17.3■□□□□ 0.36
SSRP1-204ENST00000529002 ERVK-6Q9BXR3 956 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 LYRM4Q9HD34 91 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 ERVK-19Q9WJR5 959 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 C15orf41Q9Y2V0 281 aa17.3■□□□□ 0.36
SSRP1-204ENST00000529002 SYNDIG1LA6NDD5 238 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 WASHC1A8K0Z3 465 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 GNB5O14775 395 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 COX7A2P14406 83 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 CPN2P22792 545 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 ATP5A1P25705 553 aaKnown RBP17.29■□□□□ 0.36
SSRP1-204ENST00000529002 MASP1P48740 699 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 PTH2RP49190 550 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 IGLV3-21P80748 117 aaPredicted RBP17.29■□□□□ 0.36
SSRP1-204ENST00000529002 SRYQ05066 204 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 TBL3Q12788 808 aaKnown RBP17.29■□□□□ 0.36
SSRP1-204ENST00000529002 ZNF460Q14592 562 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 SF3B4Q15427 424 aaKnown RBP eCLIP17.29■□□□□ 0.36
SSRP1-204ENST00000529002 NHSL2Q5HYW2 709 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 KRT78Q8N1N4 520 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 ACOT4Q8N9L9 421 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 ESAMQ96AP7 390 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 WWTR1Q9GZV5 400 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 TEX10Q9NXF1 929 aaPredicted RBP17.29■□□□□ 0.36
SSRP1-204ENST00000529002 NDRG3Q9UGV2 375 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 VWA7Q9Y334 891 aa17.29■□□□□ 0.36
SSRP1-204ENST00000529002 NCF1BA6NI72 391 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-204ENST00000529002 NCF1CA8MVU1 366 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-204ENST00000529002 CLPSP04118 112 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 CYP4B1P13584 511 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 NCF1P14598 390 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-204ENST00000529002 CD22P20273 847 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 SLC6A12P48065 614 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 ZNF75DP51815 510 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 RCAN2Q14206 197 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 CAPRIN1Q14444 709 aaKnown RBP17.28■□□□□ 0.36
SSRP1-204ENST00000529002 ZNF267Q14586 743 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-204ENST00000529002 EBPQ15125 230 aaKnown RBP17.28■□□□□ 0.36
SSRP1-204ENST00000529002 RNF10Q8N5U6 811 aaKnown RBP17.28■□□□□ 0.36
SSRP1-204ENST00000529002 FBXL20Q96IG2 436 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 SFXN3Q9BWM7 321 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 NT5DC2Q9H857 520 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 ZKSCAN5Q9Y2L8 839 aa17.28■□□□□ 0.36
SSRP1-204ENST00000529002 ANKRD33BA6NCL7 494 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 A8MXE2 369 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 SAP18O00422 153 aaKnown RBP17.27■□□□□ 0.36
SSRP1-204ENST00000529002 RCBTB2O95199 551 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 FPR1P21462 350 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 C18orf63Q68DL7 685 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 DESI1Q6ICB0 168 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 SLC29A4Q7RTT9 530 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 IGDCC3Q8IVU1 814 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 PRR22Q8IZ63 422 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 FAM83FQ8NEG4 500 aaPredicted RBP17.27■□□□□ 0.36
SSRP1-204ENST00000529002 SPPL2AQ8TCT8 520 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 ZPLD1Q8TCW7 415 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 RHBDF1Q96CC6 855 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 RBM18Q96H35 190 aaKnown RBP17.27■□□□□ 0.36
SSRP1-204ENST00000529002 PDLIM5Q96HC4 596 aaKnown RBP17.27■□□□□ 0.36
SSRP1-204ENST00000529002 G6PC3Q9BUM1 346 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 ANGPTL4Q9BY76 406 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 GSX2Q9BZM3 304 aa17.27■□□□□ 0.36
SSRP1-204ENST00000529002 IQANK1A0A1B0GTG1 560 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 C2orf72A6NCS6 295 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 CLGNO14967 610 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 TAPBPO15533 448 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 PGAM1P18669 254 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 LOXP28300 417 aaPredicted RBP17.26■□□□□ 0.35
SSRP1-204ENST00000529002 CXCR5P32302 372 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 RPL21P46778 160 aaKnown RBP17.26■□□□□ 0.35
SSRP1-204ENST00000529002 KCNC1P48547 511 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 SLC37A1P57057 533 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 TNK1Q13470 666 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 DOC2AQ14183 400 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 TSNQ15631 228 aaKnown RBP17.26■□□□□ 0.35
SSRP1-204ENST00000529002 C10orf62Q5T681 223 aaPredicted RBP17.26■□□□□ 0.35
SSRP1-204ENST00000529002 RNF111Q6ZNA4 994 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 C22orf34Q6ZV56 151 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 ZNF550Q7Z398 422 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 CNTN4Q8IWV2 1026 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 DND1Q8IYX4 353 aaKnown RBP17.26■□□□□ 0.35
SSRP1-204ENST00000529002 ZNF441Q8N8Z8 693 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 NAT8LQ8N9F0 302 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 BBOF1Q8ND07 529 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 ZC3HAV1LQ96H79 300 aaKnown RBP17.26■□□□□ 0.35
SSRP1-204ENST00000529002 KCNC2Q96PR1 638 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 TMEM79Q9BSE2 394 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 PLAC1Q9HBJ0 212 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 OARD1Q9Y530 152 aa17.26■□□□□ 0.35
SSRP1-204ENST00000529002 H0Y3Z8 333 aa17.25■□□□□ 0.35
SSRP1-204ENST00000529002 ZNF37AP17032 561 aaPredicted RBP17.25■□□□□ 0.35
SSRP1-204ENST00000529002 GSTM2P28161 218 aa17.25■□□□□ 0.35
SSRP1-204ENST00000529002 PTPN6P29350 595 aa17.25■□□□□ 0.35
SSRP1-204ENST00000529002 SSTR4P31391 388 aa17.25■□□□□ 0.35
SSRP1-204ENST00000529002 CASP3P42574 277 aa17.25■□□□□ 0.35
SSRP1-204ENST00000529002 STARP49675 285 aa17.25■□□□□ 0.35
SSRP1-204ENST00000529002 TGM3Q08188 693 aa17.25■□□□□ 0.35
SSRP1-204ENST00000529002 RPS6KA2Q15349 733 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms