RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 A0A1W2PP18 115 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SAGE2PA6NJ88 616 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 GABRR3A8MPY1 467 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 EVPLLA8MZ36 301 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 MYO1GB0I1T2 1018 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 C17orf105B2RV13 164 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 PLOD2O00469 737 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 FCHO1O14526 889 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 RFXANKO14593 260 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 TERTO14746 1132 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 AKAP10O43572 662 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 ERN1O75460 977 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 CDC123O75794 336 aaPredicted RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 ATP5HO75947 161 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 KCNH1O95259 989 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 MED26O95402 600 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 KRT75O95678 551 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 CTSBP07858 339 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 OTX2P32243 289 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 TRPC1P48995 793 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 TMED10P49755 219 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 NCBP2P52298 156 aaKnown RBP eCLIP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 GYS2P54840 703 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 PSMD4P55036 377 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 DIO3P55073 304 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 NRG3P56975 720 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 RPP38P78345 283 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 VAC14Q08AM6 782 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 MAP4K2Q12851 820 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 CYLC2Q14093 348 aaPredicted RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 RCAN2Q14206 197 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SYT16Q17RD7 645 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 FAM174BQ3ZCQ3 159 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SPDYE7PQ495Y7 208 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 AGKQ53H12 422 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SFT2D3Q587I9 215 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 CPZQ66K79 652 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 PLAG1Q6DJT9 500 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 FAM199XQ6PEV8 388 aaPredicted RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 MAVSQ7Z434 540 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 ARPINQ7Z6K5 226 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 PROSER1Q86XN7 944 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 VWA5B2Q8N398 1253 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SLC5A8Q8N695 610 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 C17orf47Q8NEP4 570 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 B3GNT7Q8NFL0 401 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 OR56A1Q8NGH5 318 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SFXN5Q8TD22 340 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 PMEPA1Q969W9 287 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SPDL1Q96EA4 605 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 FBXL20Q96IG2 436 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 PANX1Q96RD7 426 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SORBS1Q9BX66 1292 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 AICDAQ9GZX7 198 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SYNPO2LQ9H987 977 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 EFCAB1Q9HAE3 211 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 KCNK13Q9HB14 408 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 CACYBPQ9HB71 228 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SLC22A11Q9NSA0 550 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 DDX18Q9NVP1 670 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 CCDC167Q9P0B6 97 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 BAIAP2L1Q9UHR4 511 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 PPIEQ9UNP9 301 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 PCDHGB7Q9Y5F8 929 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 COPG1Q9Y678 874 aaKnown RBP7.43□□□□□ -1.22
SSBP3-211ENST00000528787 SCN2AQ99250 2005 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 CCDC88CQ9P219 2028 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 A0A087WV48 116 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 IGHV1-45A0A0A0MS14 117 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 C4orf51C9J302 202 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 EMC8O43402 210 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 FGF17O60258 216 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 PLOD3O60568 738 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 LDB3O75112 727 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 LRATO95237 230 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 ITGB2P05107 769 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 SERPINA7P05543 415 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 ALDOCP09972 364 aaKnown RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 ZCCHC18P0CG32 403 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 MAOAP21397 527 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 TACR1P25103 407 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 CASRP41180 1078 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 FRKP42685 505 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 PRIM2P49643 509 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 SOX8P57073 446 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 CDC20Q12834 499 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 ART3Q13508 389 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 FAM91A1Q658Y4 838 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 PAPD4Q6PIY7 484 aaKnown RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 BLOC1S3Q6QNY0 202 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 HSDL2Q6YN16 418 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 RNF111Q6ZNA4 994 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 ATG14Q6ZNE5 492 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 ANKRD37Q7Z713 158 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 MRGPREQ86SM8 312 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 GPALPP1Q8IXQ4 340 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 PRSS58Q8IYP2 241 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 TAGAPQ8N103 731 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 SLC15A4Q8N697 577 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms