RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	PTRH2	Q9Y3E5	179 aa	Known RBP	4.93	□□□□□ -1.62
PUM1-216	ENST00000525997	CLCA3P	Q9Y6N3	262 aa		4.93	□□□□□ -1.62
PUM1-216	ENST00000525997	USP24	Q9UPU5	2620 aa		4.93	□□□□□ -1.62
PUM1-216	ENST00000525997		A0A087WV62	115 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	NSG1	A0A0A6YYJ2	146 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	PRSS51	A0A1B0GVH4	220 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TCRBV16S1A1N1	A0A5B0	115 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TMEM247	A6NEH6	219 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	OR6C76	A6NM76	312 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	GABRR3	A8MPY1	467 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	MYO1G	B0I1T2	1018 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	CDK2AP1	O14519	115 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	RFXANK	O14593	260 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ANKRD28	O15084	1053 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	FGF17	O60258	216 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	PRAMEF2	O60811	474 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ERN1	O75460	977 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	CDC123	O75794	336 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	KCNH1	O95259	989 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	AGR2	O95994	175 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	CTSB	P07858	339 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ESRRA	P11474	423 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	NT5E	P21589	574 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	CALB2	P22676	271 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	UQCRC2	P22695	453 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TACR1	P25103	407 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	FRK	P42685	505 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TRPC1	P48995	793 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	PRIM2	P49643	509 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	HNRNPF	P52597	415 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	NME5	P56597	212 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	UFM1	P61960	85 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	IGLV3-21	P80748	117 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	RHAG	Q02094	409 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TP53BP2	Q13625	1128 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	KRT72	Q14CN4	511 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ZNHIT3	Q15649	155 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	UGT8	Q16880	541 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SYT16	Q17RD7	645 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SPRED3	Q2MJR0	410 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	VPS26B	Q4G0F5	336 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TIGD2	Q4W5G0	525 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	CRTC2	Q53ET0	693 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	VWA2	Q5GFL6	755 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SPANXN4	Q5MJ08	99 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	C6orf10	Q5SRN2	563 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	C18orf63	Q68DL7	685 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ZCCHC12	Q6PEW1	402 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	PAOX	Q6QHF9	649 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	BLOC1S3	Q6QNY0	202 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	C16orf89	Q6UX73	402 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TMEM64	Q6YI46	380 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	COX15	Q7KZN9	410 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	CLNK	Q7Z7G1	428 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	MTDH	Q86UE4	582 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	RIMKLA	Q8IXN7	391 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	PRSS58	Q8IYP2	241 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	VWA5B2	Q8N398	1253 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	KRTCAP2	Q8N6L1	136 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SLC38A9	Q8NBW4	561 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	MORN4	Q8NDC4	146 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	OR7G1	Q8NGA0	311 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	OR56A1	Q8NGH5	318 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	OR5L2	Q8NGL0	311 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	OR4A15	Q8NGL6	344 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SFXN5	Q8TD22	340 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	RIT1	Q92963	219 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	GFM2	Q969S9	779 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ROPN1L	Q96C74	230 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SLC45A3	Q96JT2	553 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	MARK4	Q96L34	752 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	CCDC115	Q96NT0	180 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	PANX1	Q96RD7	426 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SPSB2	Q99619	263 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ALOXE3	Q9BYJ1	711 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	RBCK1	Q9BYM8	510 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	VN1R1	Q9GZP7	353 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	MYLK2	Q9H1R3	596 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ZNF385D	Q9H6B1	395 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	SOX17	Q9H6I2	414 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	EFCAB1	Q9HAE3	211 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	HHATL	Q9HCP6	504 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	PNO1	Q9NRX1	252 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	LANCL2	Q9NS86	450 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	DDX18	Q9NVP1	670 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	THUMPD1	Q9NXG2	353 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TAS2R9	Q9NYW1	312 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ABI3	Q9P2A4	366 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	CTSF	Q9UBX1	484 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	TAGLN3	Q9UI15	199 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	BTNL2	Q9UIR0	455 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	MRTO4	Q9UKD2	239 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	PCDHGB3	Q9Y5G1	929 aa		4.92	□□□□□ -1.62
PUM1-216	ENST00000525997	ACACB	O00763	2458 aa		4.91	□□□□□ -1.62
PUM1-216	ENST00000525997	KIF26B	Q2KJY2	2108 aa		4.91	□□□□□ -1.62
PUM1-216	ENST00000525997	LOC102723996	A0A087X1L8	192 aa		4.91	□□□□□ -1.62
PUM1-216	ENST00000525997		A0A096LPI6	279 aa		4.91	□□□□□ -1.62
PUM1-216	ENST00000525997	IGKV3D-11	A0A0A0MRZ8	115 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms