RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 SEMA3DO95025 777 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 ZWINTO95229 277 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 NADKO95544 446 aaPredicted RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 MTHFD2P13995 350 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 GFAPP14136 432 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 PIGAP37287 484 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 TMED10P49755 219 aaKnown RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 SLC37A1P57057 533 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 DLG1Q12959 904 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 MYBPHQ13203 477 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 DDX39BQ13838 428 aaKnown RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 HSPB2Q16082 182 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 NTRK2Q16620 822 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 TMEM198Q66K66 360 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 RTL6Q6ICC9 239 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 MRM1Q6IN84 353 aaKnown RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 LYPD8Q6UX82 237 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 CMC1Q7Z7K0 106 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 CCDC25Q86WR0 208 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 MYLK4Q86YV6 388 aaPredicted RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 LRRC25Q8N386 305 aaPredicted RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 LIX1Q8N485 282 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 RPRMLQ8N4K4 120 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 L3MBTL4Q8NA19 623 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 PPWD1Q96BP3 646 aaKnown RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 MTERF1Q99551 399 aaKnown RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 SERPINI1Q99574 410 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 CNPPD1Q9BV87 410 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 ZNF703Q9H7S9 590 aaPredicted RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 SNX15Q9NRS6 342 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 AHSPQ9NZD4 102 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 ASB4Q9Y574 426 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 FAM215AQ9Y5M1 114 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 LIPGQ9Y5X9 500 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 MTORP42345 2549 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 SETD2Q9BYW2 2564 aaPredicted RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 A0A0A6YYD5 115 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 A0A0G2JNJ9 132 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 C2orf92A0A1B0GVN3 265 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 SH3BGRLO75368 114 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 FAM155BO75949 473 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 KLHL2O95198 593 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 SNX4O95219 450 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 C2P06681 752 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 FAM58BPP0C7Q3 252 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 NR2F6P10588 404 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 PHBP35232 272 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 BSGP35613 385 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 HNRNPH2P55795 449 aaKnown RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 NRG3P56975 720 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 RPS13P62277 151 aaKnown RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 HERVK_113P63132 956 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 ERVK-8P63133 956 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 MRPS25P82663 173 aaKnown RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 GUCY2DQ02846 1103 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 GTF2H2Q13888 395 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 ZNF267Q14586 743 aaPredicted RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 PFKFB4Q16877 469 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 C6orf163Q5TEZ5 329 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 HLA-DQA1Q5Y7H0 255 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 C18orf63Q68DL7 685 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 OR52E8Q6IFG1 317 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 GTF2H2CQ6P1K8 395 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 ADGRD1Q6QNK2 874 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 PAGE2Q7Z2X7 111 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 TMEM200AQ86VY9 491 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 NUDT13Q86X67 352 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 PM20D2Q8IYS1 436 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 CENPLQ8N0S6 344 aaPredicted RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 FAM13CQ8NE31 585 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 C17orf47Q8NEP4 570 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 NEIL3Q8TAT5 605 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 FBXO25Q8TCJ0 367 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 NINJ1Q92982 152 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 DOHHQ9BU89 302 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 ERVK-6Q9BXR3 956 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 WWTR1Q9GZV5 400 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 IPPKQ9H8X2 491 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 SEMA4BQ9NPR2 832 aaPredicted RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 ALKBH4Q9NXW9 302 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 Q9UFV3 132 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 ADAM29Q9UKF5 820 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 ERVK-19Q9WJR5 959 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 CHCHD2Q9Y6H1 151 aaPredicted RBP10.9□□□□□ -0.66
SPARC-206ENST00000524277 HCFC1P51610 2035 aa10.9□□□□□ -0.66
SPARC-206ENST00000524277 MED13LQ71F56 2210 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 SYT5O00445 386 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 DVL2O14641 736 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 GUCY1B2O75343 617 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 CLDN9O95484 217 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 CELA3AP09093 270 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 RBP1P09455 135 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 PIK3R1P27986 724 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 TYK2P29597 1187 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 CASQ1P31415 396 aa10.89□□□□□ -0.67
SPARC-206ENST00000524277 NR0B1P51843 470 aaKnown RBP10.89□□□□□ -0.67
SPARC-206ENST00000524277 EBPQ15125 230 aaKnown RBP10.89□□□□□ -0.67
SPARC-206ENST00000524277 CPSF6Q16630 551 aaKnown RBP eCLIP10.89□□□□□ -0.67
SPARC-206ENST00000524277 ARSKQ6UWY0 536 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms