RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PMP22Q01453 160 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 SRSF11Q05519 484 aaKnown RBP7.92□□□□□ -1.14
HMGB4-204ENST00000522796 SPP2Q13103 211 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 N4BP2L1Q5TBK1 243 aaPredicted RBP7.92□□□□□ -1.14
HMGB4-204ENST00000522796 NDUFAF7Q7L592 441 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 IFNEQ86WN2 208 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 RNF130Q86XS8 419 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 GCNT2Q8N0V5 402 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 STK40Q8N2I9 435 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 CELF5Q8N6W0 485 aaKnown RBP7.92□□□□□ -1.14
HMGB4-204ENST00000522796 ACBD4Q8NC06 268 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 OR56A3Q8NH54 315 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 KAT2AQ92830 837 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 PYCR2Q96C36 320 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 MED8Q96G25 268 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 PCDHB18PQ96TA0 734 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 RAB34Q9BZG1 259 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 AMBRA1Q9C0C7 1298 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 ENKD1Q9H0I2 346 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 FBXO34Q9NWN3 711 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 C3orf18Q9UK00 162 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 NIP7Q9Y221 180 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB4-204ENST00000522796 POFUT2Q9Y2G5 429 aa7.92□□□□□ -1.14
HMGB4-204ENST00000522796 AKAP11Q9UKA4 1901 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 SURF4O15260 269 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 PPIHO43447 177 aaKnown RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 MAFKO60675 156 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 TULP3O75386 442 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ITGA10O75578 1167 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 RAD17O75943 681 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 PRKCHP24723 683 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 STOMP27105 288 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 S100A11P31949 105 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ELK3P41970 407 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 SMSP52788 366 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 OPCMLQ14982 345 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ZNF284Q2VY69 593 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 GXYLT1Q4G148 440 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 PRAMEF20Q5VT98 475 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 FAM198BQ6UWH4 519 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 PRSS57Q6UWY2 283 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 LBX2Q6XYB7 198 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 KANSL1Q7Z3B3 1105 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 SLC47A2Q86VL8 602 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 CBLN2Q8IUK8 224 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 PDZD9Q8IXQ8 264 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 OR5D18Q8NGL1 313 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 OR1S1Q8NH92 325 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 GPR151Q8TDV0 419 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 THAP3Q8WTV1 239 aaPredicted RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 UCN3Q969E3 161 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 SLC35C1Q96A29 364 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ACSF2Q96CM8 615 aaPredicted RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 PHF21BQ96EK2 531 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 MRGPRX2Q96LB1 330 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 GFM1Q96RP9 751 aaKnown RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 SAP130Q9H0E3 1048 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 BCO1Q9HAY6 547 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 TLR8Q9NR97 1041 aaKnown RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 NCDNQ9UBB6 729 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 COLQQ9Y215 455 aaPredicted RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 CDYLQ9Y232 598 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 BCORQ6W2J9 1755 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 LOC100130705A0A1B0GUX0 176 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 FAM240BA0A1B0GVZ2 78 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 INMT-MINDY4F8WBC2 141 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 SLC16A3O15427 465 aaKnown RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 NDUFS3O75489 264 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 AHSA1O95433 338 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 GCP02774 474 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 DNASE1P24855 282 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 GPR15P49685 360 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 UBE2G2P60604 165 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ARHGEF7Q14155 803 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 CYP51A1Q16850 503 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 MOGAT2Q3SYC2 334 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 KLHL22Q53GT1 634 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 INTS6LQ5JSJ4 861 aaKnown RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 GLRA4Q5JXX5 417 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 CD276Q5ZPR3 534 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 B3GNTL1Q67FW5 361 aaPredicted RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 LPCAT3Q6P1A2 487 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ISCA2Q86U28 154 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 PHF13Q86YI8 300 aaPredicted RBP7.91□□□□□ -1.14
HMGB4-204ENST00000522796 KATNAL2Q8IYT4 538 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 RASGEF1AQ8N9B8 481 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 OR5T3Q8NGG3 340 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 OR4C15Q8NGM1 316 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ROPN1LQ96C74 230 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ZNF479Q96JC4 524 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 RNF146Q9NTX7 359 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ZNF222Q9UK12 451 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 CLDN16Q9Y5I7 305 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 TEX264Q9Y6I9 313 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 ADAMTSL3P82987 1691 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 SPATA31A5Q5VU36 1347 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 SPATA31A7Q8IWB4 1347 aa7.91□□□□□ -1.14
HMGB4-204ENST00000522796 TRAV19A0A0A6YYK7 116 aa7.9□□□□□ -1.14
HMGB4-204ENST00000522796 DISC1C4P0D8 188 aa7.9□□□□□ -1.14
HMGB4-204ENST00000522796 NPIPA7E9PJI5 369 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms