RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 KIF18BQ86Y91 864 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 NKAPQ8N5F7 415 aaKnown RBP11.29□□□□□ -0.6
BRF2-204ENST00000522539 SLC22A8Q8TCC7 542 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 SENP5Q96HI0 755 aaPredicted RBP11.29□□□□□ -0.6
BRF2-204ENST00000522539 KCNC2Q96PR1 638 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 TIMP4Q99727 224 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 MDFIQ99750 246 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 MAPKAP1Q9BPZ7 522 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 TBCDQ9BTW9 1192 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 ROGDIQ9GZN7 287 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 MED4Q9NPJ6 270 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 MBD3L4A6NDZ8 208 aaPredicted RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 MBD3L3A6NE82 208 aaPredicted RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 MBD3L5A6NJ08 208 aaPredicted RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 CD8B2A6NJW9 211 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 CLCA1A8K7I4 914 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 FAM171A2A8MVW0 826 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 TAPBPO15533 448 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 FGF17O60258 216 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 WISP3O95389 354 aaPredicted RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 IL18BPO95998 194 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 IL2RAP01589 272 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 CD22P20273 847 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 ATP5A1P25705 553 aaKnown RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 IVDP26440 423 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 ADSLP30566 484 aaPredicted RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 HSD17B3P37058 310 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 WNT3P56703 355 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 TGM3Q08188 693 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 FRG1Q14331 258 aaKnown RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 TSNQ15631 228 aaKnown RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 NTRK2Q16620 822 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 NHSL2Q5HYW2 709 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 STEAP4Q687X5 459 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 VASNQ6EMK4 673 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 TRMT10BQ6PF06 316 aaKnown RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 LRIG3Q6UXM1 1119 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 ACOT4Q8N9L9 421 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 SRFBP1Q8NEF9 429 aaKnown RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 OR10G3Q8NGC4 313 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 MBD3L2Q8NHZ7 208 aaPredicted RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 LINC01560Q8TB33 94 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 NTNG2Q96CW9 530 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 FBXL20Q96IG2 436 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 COX4I2Q96KJ9 171 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 ZIM3Q96PE6 472 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 F2RL3Q96RI0 385 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 EGFL8Q99944 293 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 WDR83Q9BRX9 315 aaKnown RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 TMEM79Q9BSE2 394 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 MS4A8Q9BY19 250 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 UBQLN3Q9H347 655 aa11.28□□□□□ -0.6
BRF2-204ENST00000522539 COPS7BQ9H9Q2 264 aaPredicted RBP11.28□□□□□ -0.6
BRF2-204ENST00000522539 KIAA1549Q9HCM3 1950 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 KIAA1324LA8MWY0 1029 aaPredicted RBP11.27□□□□□ -0.61
BRF2-204ENST00000522539 HRKO00198 91 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 HPNP05981 417 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 SERPINB3P29508 390 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 TRPC1P48995 793 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 NKX6-1P78426 367 aaPredicted RBP11.27□□□□□ -0.61
BRF2-204ENST00000522539 ID2Q02363 134 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 BIKQ13323 160 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 ZNF460Q14592 562 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 MORF4L2Q15014 288 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 SF3B4Q15427 424 aaKnown RBP eCLIP11.27□□□□□ -0.61
BRF2-204ENST00000522539 TGFBIQ15582 683 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 CDKL4Q5MAI5 379 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 FNDC7Q5VTL7 733 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 DGAT2L6Q6ZPD8 337 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 ZC3HC1Q86WB0 502 aaKnown RBP11.27□□□□□ -0.61
BRF2-204ENST00000522539 CCDC25Q86WR0 208 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 PM20D2Q8IYS1 436 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 LIX1Q8N485 282 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 ANKRD49Q8WVL7 239 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 SMPDL3BQ92485 455 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 HSPBAP1Q96EW2 488 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 PTCD3Q96EY7 689 aaKnown RBP11.27□□□□□ -0.61
BRF2-204ENST00000522539 ART5Q96L15 291 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 DACH2Q96NX9 599 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 MCMBPQ9BTE3 642 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 TXLNGYQ9BZA5 131 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 PSAT1Q9Y617 370 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 NINQ8N4C6 2090 aa11.27□□□□□ -0.61
BRF2-204ENST00000522539 FREM3P0C091 2139 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 C15orf38-AP3S2A0A0A6YYH1 394 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 GOLGA6L10A6NI86 522 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 RTCAO00442 366 aaKnown RBP11.26□□□□□ -0.61
BRF2-204ENST00000522539 LY6G6DO95868 133 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 CLPSP04118 112 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 COX7A2P14406 83 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 EPORP19235 508 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 HIST1H1TP22492 207 aaPredicted RBP11.26□□□□□ -0.61
BRF2-204ENST00000522539 CTSSP25774 331 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 OPRM1P35372 400 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 CASP2P42575 452 aa11.26□□□□□ -0.61
BRF2-204ENST00000522539 CDK9P50750 372 aaKnown RBP11.26□□□□□ -0.61
BRF2-204ENST00000522539 TAS2R39P59534 338 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms