RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CASD1Q96PB1 797 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 NDUFAF3Q9BU61 184 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 TMEM231Q9H6L2 316 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF696Q9H7X3 374 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 MTHFD2LQ9H903 347 aaPredicted RBP2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 ROPN1Q9HAT0 212 aaPredicted RBP2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 ATAD3AQ9NVI7 634 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 VPS54Q9P1Q0 977 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 THAP10Q9P2Z0 257 aaPredicted RBP2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 MBD2Q9UBB5 411 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 ASIC3Q9UHC3 531 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 MRTO4Q9UKD2 239 aaKnown RBP2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 PLA2G4CQ9UP65 541 aa2.9□□□□□ -1.95
HMGN1P28-201ENST00000521340 CROCC2H7BZ55 1655 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 WASHC1A8K0Z3 465 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 WASH3PC4AMC7 463 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 K7EQG2 157 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 NR5A2O00482 541 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PDXKO00764 312 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 CPLX1O14810 134 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 SPAG6O75602 509 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 STK17BO94768 372 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 NDUFA7O95182 113 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 OAS1P00973 400 aaKnown RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 IGHG3P01860 377 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 FCER2P06734 321 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PROS1P07225 676 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 GSTA2P09210 222 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 HIST1H2AGP0C0S8 130 aaPredicted RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 CCDC159P0C7I6 412 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZSCAN5DPP0CG00 497 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 GP9P14770 177 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PTPN6P29350 595 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 GPR183P32249 361 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 SGSHP51688 502 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF131P52739 623 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 NDST1P52848 882 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 GEMP55040 296 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 RPS4XP62701 263 aaKnown RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 MYBPC1Q00872 1141 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 SLC17A1Q14916 467 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 P2RY14Q15391 338 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ANKDD1AQ495B1 522 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 DCAF12Q5T6F0 453 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PWWP2BQ6NUJ5 590 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 FIP1L1Q6UN15 594 aaKnown RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 WASH2PQ6VEQ5 465 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 FRRS1Q6ZNA5 592 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PAQR9Q6ZVX9 377 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 USP43Q70EL4 1123 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ARMCX2Q7L311 632 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 LHFPL4Q7Z7J7 247 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ELMOD1Q8N336 334 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 COLGALT1Q8NBJ5 622 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 NFAM1Q8NET5 270 aaPredicted RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PRSS33Q8NF86 280 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 SSC4DQ8WTU2 575 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 TMEM37Q8WXS4 190 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PHYHIPQ92561 330 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 HIST1H2ACQ93077 130 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 MRPL24Q96A35 216 aaKnown RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 COG3Q96JB2 828 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 INPP4AQ96PE3 977 aaPredicted RBP2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 DEFB118Q96PH6 123 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 KRT12Q99456 494 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 NOTCH4Q99466 2003 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 CRACR2AQ9BSW2 395 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 NLNQ9BYT8 704 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ACTR8Q9H981 624 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 GDF3Q9NR23 364 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PLCXD1Q9NUJ7 323 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 MED17Q9NVC6 651 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ZNF446Q9NWS9 450 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 P2RX2Q9UBL9 471 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 CHRNA9Q9UGM1 479 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 PLCL2Q9UPR0 1127 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 FOXJ3Q9UPW0 622 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 WIPI2Q9Y4P8 454 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 AP1M2Q9Y6Q5 423 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 RNF215Q9Y6U7 377 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 RNF123Q5XPI4 1314 aa2.89□□□□□ -1.95
HMGN1P28-201ENST00000521340 ADGBQ8N7X0 1667 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 SUPT6HQ7KZ85 1726 aaKnown RBP2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 LAMC3Q9Y6N6 1575 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 MYH15Q9Y2K3 1946 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 KIF27Q86VH2 1401 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 HHLA1C9JL84 531 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 FAM72CH0Y354 149 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 SDHDO14521 159 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 IMPA2O14732 288 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 SH2D1BO14796 132 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 CLDN3O15551 220 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 B4GAT1O43505 415 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 KIAA0513O60268 411 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 FRAT2O75474 233 aaPredicted RBP2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 IGHEP01854 428 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 CHRNA1P02708 482 aa2.88□□□□□ -1.95
HMGN1P28-201ENST00000521340 SP1P08047 785 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms