RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 RABL2AQ9UBK7 228 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 MRPS33Q9Y291 106 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 TENM1Q9UKZ4 2725 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 hCG_1818297A0A087WSY0 165 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 A0A0G2JK05 382 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 A0A0G2JMM0 328 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 A0A1W2PPB8 328 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 A0A1W2PRS3 328 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CCDC151A5D8V7 595 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF860A6NHJ4 632 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 IQCF5A8MTL0 148 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 KIR3DP1A8MWS1 328 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 DEFB108AA8MXU0 73 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 NDUFS4O43181 175 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CHST10O43529 356 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 SPOPO43791 374 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZBTB14O43829 449 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CEP104O60308 925 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 DLX3O60479 287 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 EIF4EBP3O60516 100 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ERLIN1O75477 346 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 RCBTB2O95199 551 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 PGRP06401 933 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 MAOAP21397 527 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CHMP24386 653 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 GDF1P27539 372 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 GCKP35557 465 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 RPL21P46778 160 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 DNASE1L1P49184 302 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 GPR143P51810 404 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 NR1H2P55055 460 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 HSD17B7P56937 341 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 BTG2P78543 158 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 OCRLQ01968 901 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 MRPL28Q13084 256 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 DUSP8Q13202 625 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 GBX1Q14549 363 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ELAVL1Q15717 326 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 MPEG1Q2M385 716 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 PARP6Q2NL67 630 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF750Q32MQ0 723 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 GLE1Q53GS7 698 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 EXOSC6Q5RKV6 272 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 C6orf52Q5T4I8 152 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 TSTD2Q5T7W7 516 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 VASNQ6EMK4 673 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 BBS12Q6ZW61 710 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF572Q7Z3I7 529 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZAR1Q86SH2 424 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 LDB1Q86U70 411 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 PLD3Q8IV08 490 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CCDC50Q8IVM0 306 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 KATNAL2Q8IYT4 538 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 RCOR2Q8IZ40 523 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 KRT222Q8N1A0 295 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 SLC15A4Q8N697 577 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 MFSD9Q8NBP5 474 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 KCT2Q8NC54 265 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 MORN4Q8NDC4 146 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF740Q8NDX6 193 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 OR5T3Q8NGG3 340 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 OR14A16Q8NHC5 309 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 SGMS2Q8NHU3 365 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 SLC35G2Q8TBE7 412 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 SLC22A8Q8TCC7 542 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 PAQR8Q8TEZ7 354 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF480Q8WV37 535 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 EAF1Q96JC9 268 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CAPZA3Q96KX2 299 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 QRFPRQ96P65 431 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 TRIB1Q96RU8 372 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 TIMP4Q99727 224 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 WDR83Q9BRX9 315 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ANGPTL4Q9BY76 406 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 PARD6BQ9BYG5 372 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 PLA2G12AQ9BZM1 189 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 SHARPINQ9H0F6 387 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 P2RY12Q9H244 342 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CATSPERZQ9NTU4 200 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CNIH4Q9P003 139 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZMAT5Q9UDW3 170 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF223Q9UK11 482 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 PACSIN3Q9UKS6 424 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 RAB21Q9UL25 225 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 NENFQ9UMX5 172 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 SNX12Q9UMY4 172 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CAMK2AQ9UQM7 478 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 RUVBL2Q9Y230 463 aaKnown RBP4.47□□□□□ -1.69
SDCBP-207ENST00000520168 EFR3BQ9Y2G0 817 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 HYOU1Q9Y4L1 999 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 SNX5Q9Y5X3 404 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 CLCA3PQ9Y6N3 262 aa4.47□□□□□ -1.69
SDCBP-207ENST00000520168 TRRAPQ9Y4A5 3859 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 A0A087X1B8 175 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 A0A088AWK7 358 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 LOC100289279A0A1B0GTE1 492 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 MACROD2A1Z1Q3 448 aa4.46□□□□□ -1.7
SDCBP-207ENST00000520168 GRID2IPA4D2P6 1211 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms