RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 ICA1LQ8NDH6 482 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 OR1K1Q8NGR3 316 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 OR4Q3Q8NH05 313 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 OR4F5Q8NH21 305 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 FLVCR1-AS1Q8TAF5 88 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 ITLN1Q8WWA0 313 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 CCDC43Q96MW1 224 aaKnown RBP3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 FAM213AQ9BRX8 229 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 LIME1Q9H400 295 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 MID1IP1Q9NPA3 183 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 ZCCHC3Q9NUD5 404 aaKnown RBP3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 PRR34Q9NV39 138 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 CLEC5AQ9NY25 188 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 MRTO4Q9UKD2 239 aaKnown RBP3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 ZNF346Q9UL40 294 aaKnown RBP3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 TP53TG3Q9ULZ0 132 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 PTPRUQ92729 1446 aa3.31□□□□□ -1.88
UBLCP1-202ENST00000519276 A0A087WWV3 80 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 TRIM49BA6NDI0 452 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 MEI4A8MW99 385 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 FCER2P06734 321 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 OR9G9P0C7N8 305 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 TPBGLP0DKB5 382 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 GP9P14770 177 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 FERP16591 822 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 RPL34P49207 117 aaKnown RBP3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 EMC2Q15006 297 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 ANKRD55Q3KP44 614 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 EIPR1Q53HC9 387 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 DCAF12Q5T6F0 453 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 DDI2Q5TDH0 399 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 WDR25Q64LD2 544 aaPredicted RBP3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 REP15Q6BDI9 236 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 RFWD3Q6PCD5 774 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 SUMF1Q8NBK3 374 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 CHDHQ8NE62 594 aaPredicted RBP3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 FBXO25Q8TCJ0 367 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 SLCO4A1Q96BD0 722 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 EEF2KMTQ96G04 330 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 GPR137Q96N19 417 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 CWC25Q9NXE8 425 aaPredicted RBP3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 CIDEBQ9UHD4 219 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 PRO0461Q9UI25 63 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 ATG4BQ9Y4P1 393 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 SNX5Q9Y5X3 404 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 RAD54L2Q9Y4B4 1467 aa3.3□□□□□ -1.88
UBLCP1-202ENST00000519276 FOXI3A8MTJ6 420 aaPredicted RBP3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 DUSP11O75319 330 aaKnown RBP3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 PNPP00491 289 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 FAM200BP0CF97 657 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 HERV-K104P63124 156 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 ARF5P84085 180 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 NPRL3Q12980 569 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 TSTA3Q13630 321 aaPredicted RBP3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 TRADDQ15628 312 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 NHLRC3Q5JS37 347 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 GPR142Q7Z601 462 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 ZNF410Q86VK4 478 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 HIPK1Q86Z02 1210 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 SERPINA12Q8IW75 414 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 PARP8Q8N3A8 854 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 LINC00612Q8N6U2 182 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 RTL3Q8N8U3 475 aaKnown RBP3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 SNX21Q969T3 373 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 MRPL53Q96EL3 112 aaKnown RBP3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 CXorf58Q96LI9 332 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 TMEM245Q9H330 911 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 DCLRE1BQ9H816 532 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 HMG20BQ9P0W2 317 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 VPS54Q9P1Q0 977 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 TUBGCP4Q9UGJ1 667 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 DHX29Q7Z478 1369 aaKnown RBP3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 KIF7Q2M1P5 1343 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 FAM205AQ6ZU69 1335 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 PHF1O43189 567 aaPredicted RBP3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 GMNNO75496 209 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 APRTP07741 180 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 MBL2P11226 248 aaPredicted RBP3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 ATP6V1B1P15313 513 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 C17orf58Q2M2W7 97 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 RTL6Q6ICC9 239 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 CNTN4Q8IWV2 1026 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 OR4A16Q8NH70 328 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 ST7LQ8TDW4 575 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 AGAP11Q8TF27 550 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 KRT35Q92764 455 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 CABS1Q96KC9 395 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 RPGRIP1Q96KN7 1286 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 C19orf43Q9BQ61 176 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 FUNDC2Q9BWH2 189 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 TRPV6Q9H1D0 765 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 Q9HAA7 133 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 KCNMB3Q9NPA1 279 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 PIGVQ9NUD9 493 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 GPR83Q9NYM4 423 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 MTRRQ9UBK8 725 aa3.29□□□□□ -1.88
UBLCP1-202ENST00000519276 ZNF354AO60765 605 aaPredicted RBP3.28□□□□□ -1.88
UBLCP1-202ENST00000519276 VENTXO95231 258 aa3.28□□□□□ -1.88
UBLCP1-202ENST00000519276 FCGR3AP08637 254 aa3.28□□□□□ -1.88
UBLCP1-202ENST00000519276 ZNF18P17022 549 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms